Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1827 |
Symbol | |
ID | 3961068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1964484 |
End bp | 1965965 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916649 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_523086 |
Protein GI | 89900615 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG GCACCAAAGA GCGGTTTGTC ACGGGCACGG GGCTCGCGAT CATTGCCCTT ATTGCGGCGA TGATCTGGTG GACCTACTCG GAAGTCGAGG ACGCGAATCG CCAGCGCCGC GTGACGACTG AGATCGGACA CGAACTCACC GAGCTGAGGC TGCTCACCTT CGAGTACAAC CTGCACCACA ATGAACGGGC TCGGGTGCAG TGGACCGCGG TGTCGGACCA TGTTGACCAG CTGATCGCGG ACGCCCGGTT CCGCAGGCCC GCGCAAAGCA AAATCCTGGC CGATTTGCGG GGAAAAAGGG CGATAGGGCT GCGCCTCTTC ACCGAAATCA CCGCGGCAGA GCTCGCAGGC CGCGGGGACG TCCCATTGGA CGAGGCGGGT CGGCGACATG AGGCGCAACT GCTGAGCCAA CTGATGGTCT ACCAGCAGGA GAACTTCGCC GACGCGCAGC GCCTGACCGA CCTCGCGACG CAGCGCATCA TGGACGCCGA ATGGCAGGTG ATGATTGCAA TCCTCGCCGG GCTGGCCTTG ATCGCGTCAA TCATTGTCGC CACGTCATGG TTTCTGCGAC GCGGCGTGCT GATGCCGATC GCCCAGCTCC AGCAGGCGAC GCGCCACGTT GCCGCGGGCA ATTGGAATTT TGTTCTTGAC ATACGCGCCA AGGACGAGAT CGGTGAGTTG TCGAAAAATT TCGGCACCAT GACCCAATCG CTGCAGGCAT CGTTTGCGCA GGTCGAGCGC AGCAACCAGG ATCTCGCGGC CTTGAACAGG GAACTCGAAG CATTCAGCTA TTCCGTGTCC CACGATTTGC GCGGACCGCT GCGCAGCATG GACGGCTTCT CACTGGTGCT GATCGAGGAC TACGGCGACA AACTGGACGA AGAGGGCAAG GACGCCCTGC AGCGCATCCG TGCGGCGAGC CAGCGCATGG GCAACCTCAT CGACGACTTG CTCCGATTGT CCCAGGTGAC ACGGGCCGAG CTCAACGTGA CGCGGGTCGA CCTCAGTGCA ATCGCGCAGG ACATCGCCGA TACCCTGGAC CGGGAGCAGC CCGATCGGTC GACAAAATGG GAAATTCAAC CTGGCTTGAG CCTCCACGCC GACCTGGCGC TGACGCGAAT CGCCATGCAA AACCTGCTCC AGAACGCCTG GAAATTTACC GGCAGATCCG GGCAACCGGT GATTCGCGTT GGTGCACTGG AACGCGACTC GAAAACGATA TTTTTCGTCG CCGACAACGG CGTCGGTTTC GACATGGCGC ACGCGGCCAA TCTCTTCGGC GCCTTCCAGC GGCTGCACCA CGTTGAGGAT TTCCCCGGCA CCGGGATCGG TCTGGCGATC GTCCAGCGGA TCATCCGTCG GCACGACGGA AAGCTCTGGG CCGAGGCGAA GGAAGGCGAA GGCGCGACGT TCTTTTTCAC TCTGAAGGAA TCGAAAAATG GATCAAATGA ACAAGACCAT CCTGCTGGTT GA
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Protein sequence | MKIGTKERFV TGTGLAIIAL IAAMIWWTYS EVEDANRQRR VTTEIGHELT ELRLLTFEYN LHHNERARVQ WTAVSDHVDQ LIADARFRRP AQSKILADLR GKRAIGLRLF TEITAAELAG RGDVPLDEAG RRHEAQLLSQ LMVYQQENFA DAQRLTDLAT QRIMDAEWQV MIAILAGLAL IASIIVATSW FLRRGVLMPI AQLQQATRHV AAGNWNFVLD IRAKDEIGEL SKNFGTMTQS LQASFAQVER SNQDLAALNR ELEAFSYSVS HDLRGPLRSM DGFSLVLIED YGDKLDEEGK DALQRIRAAS QRMGNLIDDL LRLSQVTRAE LNVTRVDLSA IAQDIADTLD REQPDRSTKW EIQPGLSLHA DLALTRIAMQ NLLQNAWKFT GRSGQPVIRV GALERDSKTI FFVADNGVGF DMAHAANLFG AFQRLHHVED FPGTGIGLAI VQRIIRRHDG KLWAEAKEGE GATFFFTLKE SKNGSNEQDH PAG
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