Gene Rfer_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1806 
Symbol 
ID3962203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1943608 
End bp1946205 
Gene Length2598 bp 
Protein Length865 aa 
Translation table11 
GC content60% 
IMG OID637916629 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_523066 
Protein GI89900595 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.300646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA ACTACCGTGC CCACGTGGCC GAACGCGCCG CCCTCGGCAT TCCCCCTTTG 
CCCTTGTCGG CCCAGCAGAC CGCCGAACTC ATCGAGCTGC TCAAAAATCC GCCCAAGGGT
GAAGAAGCCA CTCTGCTGGA CCTGATCACG CACCGCGTGC CCGCCGGTGT TGACGACGCG
GCCAAGGTCA AGGCCTCTTA TTTGGCCGCC GTGGCGCATG GCACTGAAAA ATGCCCGCTG
ATCTCGCCTG AAAAAGCTAC CGAGCTGCTG GGCACCATGC TGGGCGGCTA CAACATTAGC
CCGCTGATCG ATTTGCTGGA TCAGCCGGCG GTGGCCCAGG TGGCGGCCAA TGGGCTGAAA
AAGACCTTGC TGATGTTCGA CCAGTTCCAT GATGTGCAGG AAAAAGCCGA CAAAGGCAAC
GCACAAGCCA AAGCCGTGTT GCAAAGCTGG GCTGATGCCG AATGGTTCAC CTCGCGCCCG
GAAGTGCCGC AGTCGATCAA GCTCACTGTC TTCAAGGTGG CCGGCGAAAT CAACACCGAT
GACCTGTCGC CGGCACCCGA TGCCTTCAGC CGCCCGGACA TTCCCTTGCA CGCTTTGGCG
ATGCACAAAA ATGCCCGCCC CGGCATCGTT CCCGAAGAAG ACGGCAAGCG CGGCCCGGTC
AAGTTTTTTG ATGAACTCAA GGCCAAGGGC AACCTGGTGG CCTATGTGGG TGATGTGGTG
GGCACGGGCT CCAGCCGCAA ATCAGCCACC AATTCGGTGC TCTGGTTCAC TGGCGAGGAC
ATTCCGTTCG TGCCGAACAA GCGTTTCGGT GGTGTCTGTC TGGGCGGCAA GATCGCCCCG
ATTTTCTACA ACACCATGGA AGACTCGGGC GCGTTGCCGA TCGAGCTCGA TGTGAGCCAG
ATGGCCATGG GCGACGTCAT CGAGCTGCGC CCTTATGACG GTAAAGCCTT GAAAGACGGC
AAGGTCGTGG CCGAGTTCAA ACTCAAGAGC GACGTCTTGT TTGACGAGGT GCGCGCTGGT
GGCCGCATTC CCTTGATCAT CGGCCGCGGC CTGACCACCA AGGCGCGCGA AGCGCTGGGC
TTGCCCGTGA GCACCTTGTT CCGCCTGCCG CAAAACCCGG CGGATACCGG CAAGGGTTTC
AGCCTGGCGC AAAAAATTGT CGGCCGTGCC TGCGGTCTGC CAGAAGGTCA AGGCGTGCGT
CCCGGCACTT ACTGTGAGCC GAAAATGACC AGCGTGGGTT CGCAGGACAC CACCGGTCCG
ATGACGCGCG ACGAGTTGAA AGACCTGGCC TGCCTGGGCT TCAGTGCTGA TCTGGTGATG
CAGTCTTTCT GCCACACCGC GGCCTACCCG AAGCCGGTGG ACGTGAAAAT GCACCACGAA
CTGCCCGCCT TCATGAACAA CCGCGGTGGC ATTGCGCTGC GCCCAGGCGA CGGCATCATT
CACTCGTGGC TCAACCGCAT GTTGTTGCCT GATACCGTGG GCACCGGCGG CGACAGCCAC
ACCCGTTTCC CGATCGGCAT CAGCTTCCCC GCCGGCTCCG GCCTGGTGGC GTTTGGCGCC
GCCACCGGCG TCATGCCGCT GGACATGCCA GAGAGCGTGC TGGTGCGCTT CAAGGGCAAG
ATGCAGCCGG GCGTCACGCT GCGTGATCTG GTCAATGCCA TTCCGCTCTA TGCCATCAAG
GCTGGGCTGT TGACGGTGGC CAAGCAGGGC AAGAAGAACG TATTCTCGGG CCGTATTCTG
GAAATCGAAG GCCTGCCGGA TCTCAAGGTG GAGCAGGCCT TTGAGCTTAG CGACGCTTCC
GCCGAACGTA GCGCCGGTGG TTGCACTGTC AAGCTGAACA AAGAGCCCAT CATTGAGTAC
ATCAACAGCA ATATCACGTT GCTCAAATGG ATGATTGCGA CCGGCTACCA AGATGCGCGC
ACCATCAACC GCCGCATCAA AGCCATGCAA GCCTGGCTCG CCAACCCGCA GTTGCTGGAG
CGTGATGCTG ATGCCGAGTA CGCTGCCGTG ATCGAGATCG ATCTGGCCGA CATTCATGAG
CCCATCGTGG CTTGCCCGAA CGACCCCGAT GATGTGAAGA CACTGTCTGA AGTTGCCGGC
GCCAAGATCG AAGAAGTCTT CATCGGCTCG TGCATGACCA ATATCGGTCA CTTCCGCGCA
GCCAGCAAGC TGCTGGAAAA CAAGCGTGAT ATCCCGGTCA AATTGTGGGT CGCGCCGCCG
ACCAAGATGG ATGCCAAGCA GTTGAGCGAA GAAGGCCATT ACGGCGTGCT CGGCTCGGCC
GGTGCGCGCA TGGAAATGCC GGGCTGCAGT CTGTGCATGG GCAACCAGGC ACAGGTCAAG
GAAGGCGCTG TGGTGTTCTC CACGTCAACG CGCAACTTTC CGAACCGCTT GGGCAAGAAC
AGCAACGTCT ACCTGGGCAG CGCGGAACTG GCGGCCATTT GTGCCAAGCT GGGGCGCATT
CCGACCAAAG CCGAGTACAT GGCCGACATG GGCGTGCTGA CCGCAGCCAG CGACAAGGTT
TACCAGTACC TGAACTTCGA CAAGGTGCAA GACTACACCG ACGCCGCAGC CTCCGTGGCA
GAAAGTGTTG CCGCTTAA
 
Protein sequence
MLKNYRAHVA ERAALGIPPL PLSAQQTAEL IELLKNPPKG EEATLLDLIT HRVPAGVDDA 
AKVKASYLAA VAHGTEKCPL ISPEKATELL GTMLGGYNIS PLIDLLDQPA VAQVAANGLK
KTLLMFDQFH DVQEKADKGN AQAKAVLQSW ADAEWFTSRP EVPQSIKLTV FKVAGEINTD
DLSPAPDAFS RPDIPLHALA MHKNARPGIV PEEDGKRGPV KFFDELKAKG NLVAYVGDVV
GTGSSRKSAT NSVLWFTGED IPFVPNKRFG GVCLGGKIAP IFYNTMEDSG ALPIELDVSQ
MAMGDVIELR PYDGKALKDG KVVAEFKLKS DVLFDEVRAG GRIPLIIGRG LTTKAREALG
LPVSTLFRLP QNPADTGKGF SLAQKIVGRA CGLPEGQGVR PGTYCEPKMT SVGSQDTTGP
MTRDELKDLA CLGFSADLVM QSFCHTAAYP KPVDVKMHHE LPAFMNNRGG IALRPGDGII
HSWLNRMLLP DTVGTGGDSH TRFPIGISFP AGSGLVAFGA ATGVMPLDMP ESVLVRFKGK
MQPGVTLRDL VNAIPLYAIK AGLLTVAKQG KKNVFSGRIL EIEGLPDLKV EQAFELSDAS
AERSAGGCTV KLNKEPIIEY INSNITLLKW MIATGYQDAR TINRRIKAMQ AWLANPQLLE
RDADAEYAAV IEIDLADIHE PIVACPNDPD DVKTLSEVAG AKIEEVFIGS CMTNIGHFRA
ASKLLENKRD IPVKLWVAPP TKMDAKQLSE EGHYGVLGSA GARMEMPGCS LCMGNQAQVK
EGAVVFSTST RNFPNRLGKN SNVYLGSAEL AAICAKLGRI PTKAEYMADM GVLTAASDKV
YQYLNFDKVQ DYTDAAASVA ESVAA