Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1806 |
Symbol | |
ID | 3962203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1943608 |
End bp | 1946205 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637916629 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_523066 |
Protein GI | 89900595 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.300646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAA ACTACCGTGC CCACGTGGCC GAACGCGCCG CCCTCGGCAT TCCCCCTTTG CCCTTGTCGG CCCAGCAGAC CGCCGAACTC ATCGAGCTGC TCAAAAATCC GCCCAAGGGT GAAGAAGCCA CTCTGCTGGA CCTGATCACG CACCGCGTGC CCGCCGGTGT TGACGACGCG GCCAAGGTCA AGGCCTCTTA TTTGGCCGCC GTGGCGCATG GCACTGAAAA ATGCCCGCTG ATCTCGCCTG AAAAAGCTAC CGAGCTGCTG GGCACCATGC TGGGCGGCTA CAACATTAGC CCGCTGATCG ATTTGCTGGA TCAGCCGGCG GTGGCCCAGG TGGCGGCCAA TGGGCTGAAA AAGACCTTGC TGATGTTCGA CCAGTTCCAT GATGTGCAGG AAAAAGCCGA CAAAGGCAAC GCACAAGCCA AAGCCGTGTT GCAAAGCTGG GCTGATGCCG AATGGTTCAC CTCGCGCCCG GAAGTGCCGC AGTCGATCAA GCTCACTGTC TTCAAGGTGG CCGGCGAAAT CAACACCGAT GACCTGTCGC CGGCACCCGA TGCCTTCAGC CGCCCGGACA TTCCCTTGCA CGCTTTGGCG ATGCACAAAA ATGCCCGCCC CGGCATCGTT CCCGAAGAAG ACGGCAAGCG CGGCCCGGTC AAGTTTTTTG ATGAACTCAA GGCCAAGGGC AACCTGGTGG CCTATGTGGG TGATGTGGTG GGCACGGGCT CCAGCCGCAA ATCAGCCACC AATTCGGTGC TCTGGTTCAC TGGCGAGGAC ATTCCGTTCG TGCCGAACAA GCGTTTCGGT GGTGTCTGTC TGGGCGGCAA GATCGCCCCG ATTTTCTACA ACACCATGGA AGACTCGGGC GCGTTGCCGA TCGAGCTCGA TGTGAGCCAG ATGGCCATGG GCGACGTCAT CGAGCTGCGC CCTTATGACG GTAAAGCCTT GAAAGACGGC AAGGTCGTGG CCGAGTTCAA ACTCAAGAGC GACGTCTTGT TTGACGAGGT GCGCGCTGGT GGCCGCATTC CCTTGATCAT CGGCCGCGGC CTGACCACCA AGGCGCGCGA AGCGCTGGGC TTGCCCGTGA GCACCTTGTT CCGCCTGCCG CAAAACCCGG CGGATACCGG CAAGGGTTTC AGCCTGGCGC AAAAAATTGT CGGCCGTGCC TGCGGTCTGC CAGAAGGTCA AGGCGTGCGT CCCGGCACTT ACTGTGAGCC GAAAATGACC AGCGTGGGTT CGCAGGACAC CACCGGTCCG ATGACGCGCG ACGAGTTGAA AGACCTGGCC TGCCTGGGCT TCAGTGCTGA TCTGGTGATG CAGTCTTTCT GCCACACCGC GGCCTACCCG AAGCCGGTGG ACGTGAAAAT GCACCACGAA CTGCCCGCCT TCATGAACAA CCGCGGTGGC ATTGCGCTGC GCCCAGGCGA CGGCATCATT CACTCGTGGC TCAACCGCAT GTTGTTGCCT GATACCGTGG GCACCGGCGG CGACAGCCAC ACCCGTTTCC CGATCGGCAT CAGCTTCCCC GCCGGCTCCG GCCTGGTGGC GTTTGGCGCC GCCACCGGCG TCATGCCGCT GGACATGCCA GAGAGCGTGC TGGTGCGCTT CAAGGGCAAG ATGCAGCCGG GCGTCACGCT GCGTGATCTG GTCAATGCCA TTCCGCTCTA TGCCATCAAG GCTGGGCTGT TGACGGTGGC CAAGCAGGGC AAGAAGAACG TATTCTCGGG CCGTATTCTG GAAATCGAAG GCCTGCCGGA TCTCAAGGTG GAGCAGGCCT TTGAGCTTAG CGACGCTTCC GCCGAACGTA GCGCCGGTGG TTGCACTGTC AAGCTGAACA AAGAGCCCAT CATTGAGTAC ATCAACAGCA ATATCACGTT GCTCAAATGG ATGATTGCGA CCGGCTACCA AGATGCGCGC ACCATCAACC GCCGCATCAA AGCCATGCAA GCCTGGCTCG CCAACCCGCA GTTGCTGGAG CGTGATGCTG ATGCCGAGTA CGCTGCCGTG ATCGAGATCG ATCTGGCCGA CATTCATGAG CCCATCGTGG CTTGCCCGAA CGACCCCGAT GATGTGAAGA CACTGTCTGA AGTTGCCGGC GCCAAGATCG AAGAAGTCTT CATCGGCTCG TGCATGACCA ATATCGGTCA CTTCCGCGCA GCCAGCAAGC TGCTGGAAAA CAAGCGTGAT ATCCCGGTCA AATTGTGGGT CGCGCCGCCG ACCAAGATGG ATGCCAAGCA GTTGAGCGAA GAAGGCCATT ACGGCGTGCT CGGCTCGGCC GGTGCGCGCA TGGAAATGCC GGGCTGCAGT CTGTGCATGG GCAACCAGGC ACAGGTCAAG GAAGGCGCTG TGGTGTTCTC CACGTCAACG CGCAACTTTC CGAACCGCTT GGGCAAGAAC AGCAACGTCT ACCTGGGCAG CGCGGAACTG GCGGCCATTT GTGCCAAGCT GGGGCGCATT CCGACCAAAG CCGAGTACAT GGCCGACATG GGCGTGCTGA CCGCAGCCAG CGACAAGGTT TACCAGTACC TGAACTTCGA CAAGGTGCAA GACTACACCG ACGCCGCAGC CTCCGTGGCA GAAAGTGTTG CCGCTTAA
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Protein sequence | MLKNYRAHVA ERAALGIPPL PLSAQQTAEL IELLKNPPKG EEATLLDLIT HRVPAGVDDA AKVKASYLAA VAHGTEKCPL ISPEKATELL GTMLGGYNIS PLIDLLDQPA VAQVAANGLK KTLLMFDQFH DVQEKADKGN AQAKAVLQSW ADAEWFTSRP EVPQSIKLTV FKVAGEINTD DLSPAPDAFS RPDIPLHALA MHKNARPGIV PEEDGKRGPV KFFDELKAKG NLVAYVGDVV GTGSSRKSAT NSVLWFTGED IPFVPNKRFG GVCLGGKIAP IFYNTMEDSG ALPIELDVSQ MAMGDVIELR PYDGKALKDG KVVAEFKLKS DVLFDEVRAG GRIPLIIGRG LTTKAREALG LPVSTLFRLP QNPADTGKGF SLAQKIVGRA CGLPEGQGVR PGTYCEPKMT SVGSQDTTGP MTRDELKDLA CLGFSADLVM QSFCHTAAYP KPVDVKMHHE LPAFMNNRGG IALRPGDGII HSWLNRMLLP DTVGTGGDSH TRFPIGISFP AGSGLVAFGA ATGVMPLDMP ESVLVRFKGK MQPGVTLRDL VNAIPLYAIK AGLLTVAKQG KKNVFSGRIL EIEGLPDLKV EQAFELSDAS AERSAGGCTV KLNKEPIIEY INSNITLLKW MIATGYQDAR TINRRIKAMQ AWLANPQLLE RDADAEYAAV IEIDLADIHE PIVACPNDPD DVKTLSEVAG AKIEEVFIGS CMTNIGHFRA ASKLLENKRD IPVKLWVAPP TKMDAKQLSE EGHYGVLGSA GARMEMPGCS LCMGNQAQVK EGAVVFSTST RNFPNRLGKN SNVYLGSAEL AAICAKLGRI PTKAEYMADM GVLTAASDKV YQYLNFDKVQ DYTDAAASVA ESVAA
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