| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1803 |
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| Symbol | |
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| ID | 3962200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1940692 |
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| End bp | 1941678 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916626 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_523063 |
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| Protein GI | 89900592 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0126909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AGCCCGTCCG CGTTGCCGTT ACCGGCGCAG CTGGTCAAAT TGGTTACGCT
ATTCTGTTCC GCATCGCCTC CGGCGAAATG TTGGGCAAGG ACCAACCCGT GATTTTGCAA
TTGCTGGAGG TTCCGGTGGA GAAGGCACAG CAGGCGTTGC AAGGCGTCAT GATGGAACTG
CAAGATTGCG CGTTCCCGTT GCTGGCGGGT ATGGAGGCGC ACAGTGACCC CATGACGGCT
TTCAAAGACG TTGACTACGC TTTGCTGATT GGTTCGCGTC CGCGCGGCCC CGGTATGGAG
CGTGCCGAGT TGCTGGCTGT CAATGGCGCT ATCTTTACCG CACAAGGCAA GGCGCTGAAC
GCCGTAGCGA GCCGCAATGT CAAGGTGTTG GTGGTTGGCA ACCCGGCCAA CACCAATGCT
TATATTGCCA TGAAGAGCGC GCCTGATCTG CCTGCCAAGA ATTTCACCGC CATGCTGCGT
CTGGATCACA ACCGCGCCTT GAGCCAACTC GCCTCCAAGA CCGGCAAAGC CGTGGCTGAC
ATTGAAAAAA TGGCAGTCTG GGGCAATCAT TCACCCACCA TGTACGCTGA CTACCGTTTT
GCCACCATCA ATGGCGAAAG TGTCAAGGAC ATGATCAATG ACCAGGACTG GAACGCCAAC
ACCTTCCTGC CCACCGTGGG CAAGCGCGGC GCGGCCATCA TTGCCGCCCG GGGTGTGTCG
TCGGCCGCCT CCGCTGCCAA TGCAGCCATT GACCACATGC GCGACTGGGC GCTGGGCACC
AACGGCAAGT GGGTCACCAT GGGCATCCCG TCGGACGGTC AATATGGCAT TCCGAAAGAG
ACCATGTTTG GCTTTCCCGT GACCTGTGAA GGCGGTGAAT ACAAGGTGGT GCAAAACCTG
CCCATCGACG CGTTCAGCCA GGAATGCATC AACAAGACGC TCAAAGAGCT GCAAGACGAG
CAAGCGGGCG TGGCCCACCT GCTGTAA
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| Protein sequence | MSKKPVRVAV TGAAGQIGYA ILFRIASGEM LGKDQPVILQ LLEVPVEKAQ QALQGVMMEL
QDCAFPLLAG MEAHSDPMTA FKDVDYALLI GSRPRGPGME RAELLAVNGA IFTAQGKALN
AVASRNVKVL VVGNPANTNA YIAMKSAPDL PAKNFTAMLR LDHNRALSQL ASKTGKAVAD
IEKMAVWGNH SPTMYADYRF ATINGESVKD MINDQDWNAN TFLPTVGKRG AAIIAARGVS
SAASAANAAI DHMRDWALGT NGKWVTMGIP SDGQYGIPKE TMFGFPVTCE GGEYKVVQNL
PIDAFSQECI NKTLKELQDE QAGVAHLL
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