Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1800 |
Symbol | |
ID | 3962197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1938696 |
End bp | 1939061 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637916623 |
Product | succinate dehydrogenase, cytochrome b subunit |
Protein accession | YP_523060 |
Protein GI | 89900589 |
COG category | [C] Energy production and conversion |
COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.211028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTTA ATTTTGGTCC TCATCGCCTT GTTGTCGGAG CTCACTACGG TATGCGCGAC TGGCTTTCCC AACGTGTGAC CGCTGTCCTG ATGGCGCTGT TTACCGTGCT GGTTCTGGCC GAGCTTATAT TTACCAAGGG CCCTATCGGC TATGCCCAAT GGGCCGGTAT TTTTTCACCG CAATGGATGA AGGCTTTGAC CTTTACCGTC ATCCTCTCCC TGCTCTACCA CGTGTGGGTT GGCATGCGTA ACATCTTCCA GGACTACGTC CATCCCTATG GCGTTCGCTT TGTCCTGGAC GTATTTGCCA TCGTCTGGCT GGTCAGCTGC GCAGGCTGGG GCATTCAAGT CTTGTGGCGC CTGTAA
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Protein sequence | MSVNFGPHRL VVGAHYGMRD WLSQRVTAVL MALFTVLVLA ELIFTKGPIG YAQWAGIFSP QWMKALTFTV ILSLLYHVWV GMRNIFQDYV HPYGVRFVLD VFAIVWLVSC AGWGIQVLWR L
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