| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1799 |
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| Symbol | |
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| ID | 3962196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1936798 |
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| End bp | 1938603 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916622 |
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| Product | succinate dehydrogenase, flavoprotein subunit |
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| Protein accession | YP_523059 |
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| Protein GI | 89900588 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTA CTTCCAAAAT TACCAAGCGC AAATTTGACG TCGTTATCGT CGGTGCTGGC
GGCGCTGGCA TGAGCGCCTC GCTTCAACTG GCCAATGCCG GCCTGAACGT CGCGGTGCTG
TCCAAGGTAT TCCCGACACG ATCTCACACC GTTGCAGCAC AGGGCGGCAT CGGCGCCGCC
CTAGGCAACA TGGCCGAGGA TAACTGGCAT TATCACTTTT ACGACACCAT CAAGGGGTCG
GACTGGTTGG GCGACCAAGA TGCGATTGAG TTCATGTGCC GCGAGGCGCC CAAAGTGGTT
TACGAACTCG AACACTTCGG CATGCCGTTT GACCGCAATC CTGATGGCAC CATTTACCAG
CGTCCTTTTG GGGGGCATTC CAGCAACTAT GGCGAAAAAC CAGTTGGGCG CGCCTGCGCA
GCGGCGGACC GCACAGGTCA TGCCATGCTG CACACGCTGT ATCAGCAAAA CGTCAAGGCG
CGAACCAATT TCTTTGTCGA GTGGATGGCG CTGGATCTGA TTCGCGACGC CGATGGCGAT
GTCGTTGGCG TCACGGCACT CGAGATGGAA ACCGGTGAAG TCTACATTTT GCAGGCGAAG
ACGGTCATGA TAGCGTCAGG TGGCGCCGGT CGGATTTTTG CCGCATCGAC CAACGCCTAC
ATCAATACGG GTGATGGGCT GGGGATGGCG GCTCGCGCCG GCATTCCTTT GCAAGACATG
GAGTTCTGGC AGTTTCACCC CACGGGCGTG GCTGGCGCAG GCGTCCTGCT CACCGAAGGC
TGTCGTGGTG AAGGCGCGAT TCTGCGCAAC AGCAATGGAG AGCGCTTCAT GGAGCGTTAT
GCACCCACCA TGAAGGACTT GGCGCCCCGC GACTTTGTGT CGCGCTGCAT GGACCAGGAA
ATCAAGGAAG GACGCGGTTG CGGCCCGAAC AAGAACTACA TCAACCTGGA CATGACGCAC
CTGGGTGCCG AGACGATCGC GCTGCGCTTG CCCAGCGTGT TTGAAATCGG CCACAACTTT
GCCAATGTCG ACATCACCAA AGAGCCGATC CCGGTGATTC CGACCAACCA TTACCAGATG
GGCGGCATTC CCAGCAATAT CAGCGGTCAG GTCGTTGTGC CCAGCAGCAG TGGGGCGCAG
GTAGTCGTCA ACGGTCTGTA CGCTGTGGGC GAATGTGCCT GTGTCAGCGT GCACGGCGCA
AATCGACTAG GCACCAACTC CTTGCTTGAC ATCGTGGTTT TTGGCCGTGC TGCAGGCCTG
CACATCATCG ATTTCAACAA CAAGAACACG GAACACAAGC CGATACCGGC CAATGCCGCG
GATATTTCCA TCGAACGCCT TGACCGGCTC AACACGGCCA CGACAGGAGA ATACGCGCAG
GTTGTCGCTG GCGACATGCG CGACATCATG CAGCAGCACG CCAGCGTGTT CCGTACCCAG
GCGAGCATGG ACGAAGGCGT CGTCAAGATT GCCCAATTGC GCCAACGCGT CACCGATATC
AAGCTGACCG ACAAGTCGCA AATCTTCAAC ACTGAGCGCA TCGAGGCACT CGAAGTGGAA
AACATGATTG AAGTGGCTCA GTCAACCATG GTGTCGGCAG CGGCACGGCA TGAATGCCGT
GGTGCTCACA GCGTGATGGA TTACGACCGT CCCGCTGACG ACGCCACCTG TCCATTGGGA
CGAGACGATG TCAATTGGCT CAAACACACA TTGTGGGACA AAGCCACCAA CAGTCTGAGC
TACAAGCCAG TCAACCTCAA ACCCCTGACT GTTGCCTCCG TACCGCCCAA GATCCGAACC
TTTTGA
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| Protein sequence | MTATSKITKR KFDVVIVGAG GAGMSASLQL ANAGLNVAVL SKVFPTRSHT VAAQGGIGAA
LGNMAEDNWH YHFYDTIKGS DWLGDQDAIE FMCREAPKVV YELEHFGMPF DRNPDGTIYQ
RPFGGHSSNY GEKPVGRACA AADRTGHAML HTLYQQNVKA RTNFFVEWMA LDLIRDADGD
VVGVTALEME TGEVYILQAK TVMIASGGAG RIFAASTNAY INTGDGLGMA ARAGIPLQDM
EFWQFHPTGV AGAGVLLTEG CRGEGAILRN SNGERFMERY APTMKDLAPR DFVSRCMDQE
IKEGRGCGPN KNYINLDMTH LGAETIALRL PSVFEIGHNF ANVDITKEPI PVIPTNHYQM
GGIPSNISGQ VVVPSSSGAQ VVVNGLYAVG ECACVSVHGA NRLGTNSLLD IVVFGRAAGL
HIIDFNNKNT EHKPIPANAA DISIERLDRL NTATTGEYAQ VVAGDMRDIM QQHASVFRTQ
ASMDEGVVKI AQLRQRVTDI KLTDKSQIFN TERIEALEVE NMIEVAQSTM VSAAARHECR
GAHSVMDYDR PADDATCPLG RDDVNWLKHT LWDKATNSLS YKPVNLKPLT VASVPPKIRT
F
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