| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1796 |
|---|
| Symbol | gltA |
|---|
| ID | 3962193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1934395 |
|---|
| End bp | 1935705 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637916619 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_523056 |
|---|
| Protein GI | 89900585 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.216782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAG CTGACAATAA AGCCACCCTG TCGTTCAGCG ACGGCAAACC CAGCATCGAC
TTGCCGGTGT ACCAAGGCAC CGTCGGACCG GATGTGATTG ACATTCGCAA GTTGTACGGT
CAGACCGGCA TGTTCACCTA TGATCCGGGT TTCTTGTCCA CGGCTTCGTG CCAGTCGGCC
ATCACTTACA TTGACGGTGA CAAAGGTGAA CTGCTGTACC GCGGCTATCC CATCGAGCAG
TTGGCCACCA ACTGCGATTT CATGGAAACC TGCCATTTGC TGCTGTACGG AAACCTGCCG
GATGCCGCAG GCAAGGAAGT ATTCACCAAA CGTGTGACCA ACCACACCAT GGTCAGCGAG
CAGATGCAGT TTTTCCTGCG CGGCTTTCGG CGTGACGCCC ATCCGATGGC CATCATGACC
GGCCTGGTCG GCGCCCTGTC GGCGTTCTAC CATGACAGCA CCGATATCAA CAACCCTGAG
CATCGTGAAA TTTCGGCGAT CCGGCTGATC GCCAAGATGC CGACTCTGGT GGCCATGGCC
TACAAATACA GCGTCGGCCA GCCTTACATG TATCCGCAGA ACGACCTCAG CTATGCGGGC
AACTTCATGC GCATGATGTT TGCCACACCC TGCGAAGAAT ACAAGGTCAA TCCGATCATT
GAACGCGCCA TGGATCGCAT CTTTATCCTG CATGCAGACC ACGAACAAAA CGCATCTACT
TCCACTGTTC GACTGTGCGG CAGTTCAGGA ACCAACCCGT TTGCGGCAAT TGCAGCTGGC
GTGGCTTGTC TGTGGGGCCC GGCCCATGGT GGCGCCAACG AAGCTTGTTT GAACATGCTT
GGTGAGATCC AGCAAATGGG CGGCATCGCC AAAGTTGGTC ATTTCATGGA ACAGGTCAAG
GACAAGAATT CTGGCGTCAA GCTGATGGGC TTTGGACACC GGGTTTACAA GAACTACGAT
CCACGCGCCA AACTGATGCA GGAAACTTGC AAAGAGGTTC TGGGTGCGCT CGGCCTGGAA
AATGACCCTC TGTTCAAGCT GGCCATGGCC CTGGAAAAGA TTGCGCTGGA AGACGAATAC
TTTGTCTCGC GCAAGCTCTA CCCCAACGTC GATTTCTACT CGGGTATCGT GCAACGTGCC
ATCGGCATTC CAGTCAACAT GTTCACCGGG GTTTTCGCAC TGGCCCGCAC TGTCGGCTGG
ATTGCCCAAC TTAACGAGAT GATCAGCGAC CCTGAATACA AAATTGGTCG TCCGCGTCAA
CTGTTCTCTG GTTCTGTCAA ACGGGATGTT CTGCCGATTT CCAAACGCTG A
|
|---|
| Protein sequence | MKLADNKATL SFSDGKPSID LPVYQGTVGP DVIDIRKLYG QTGMFTYDPG FLSTASCQSA
ITYIDGDKGE LLYRGYPIEQ LATNCDFMET CHLLLYGNLP DAAGKEVFTK RVTNHTMVSE
QMQFFLRGFR RDAHPMAIMT GLVGALSAFY HDSTDINNPE HREISAIRLI AKMPTLVAMA
YKYSVGQPYM YPQNDLSYAG NFMRMMFATP CEEYKVNPII ERAMDRIFIL HADHEQNAST
STVRLCGSSG TNPFAAIAAG VACLWGPAHG GANEACLNML GEIQQMGGIA KVGHFMEQVK
DKNSGVKLMG FGHRVYKNYD PRAKLMQETC KEVLGALGLE NDPLFKLAMA LEKIALEDEY
FVSRKLYPNV DFYSGIVQRA IGIPVNMFTG VFALARTVGW IAQLNEMISD PEYKIGRPRQ
LFSGSVKRDV LPISKR
|
|---|
| |