| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1795 |
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| Symbol | |
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| ID | 3963315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1932810 |
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| End bp | 1934282 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916618 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_523055 |
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| Protein GI | 89900584 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.367399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCA CAAAAATTGA AACGCACGGA CGCACGCTGT ACGACAAACT CTGGGACGAA
CATGTTGTCC ATACGGAAGA AGACGGCACG GCCATCTTGT ATATAGACCG CCATCTGGTG
CACGAGGTCA CAAGTCCACA AGCCTTTGAA GGCCTGCGCC AGGCGGGCCG CAAGGTGTGG
CGCGTCAGTT CTATCGTAGC CACGGCCGAT CACAACACGC CGACCACCGG CTGGGACTTG
GGCTATGACG GCATCACGGA CCCCACCAGC AAAGAGCAGG TCGTGACGCT GGACAGCAAT
ATGCAGGAAT TCGGCGCGGC CGCCTATTTT CCGTTCATGT CAAAACGCCA GGGCATCGTC
CACGTCATCG GGCCAGAGAA TGGCGCCACA TTGCCAGGCA TGACGGTCGT TTGTGGTGAC
TCGCACACGT CCACTCACGG CGCCTTTGGC GCATTGGCCC ATGGCATCGG CACCAGTGAG
GTCGAGCACG TCATGGCGAC GCAAACCCTG CTGGCCAAAA AAGCAAAAAA CATGCTGATT
CGGGTCGATG GCACCTTGCA GCGAGGCTGC AGTGGCAAAG ATATTGTGCT GGCCATCATC
GGCAAAATCG GTACCGCAGG CGGCACCGGC TACACCATTG AATTTGGCGG CTCCGCCATT
CGTGCCTTGA GCATGGAAGG CCGCATGACC GTGTGTAATA TGGCCATTGA AGCCGGTGCG
CGTGCCGGCT TGGTGGCAGT GGACGAAAAA ACCATCGAGT ACGTCAAGGG CCGGCCGCTG
GCGCCGGGGC ACAACGCCGC CAACGACACG GCCGCTGCCG TCGAATGGGA CCAGGCGGTG
GCGTACTGGA AGACCTTGCA CTCTGACGCC GACGCCCACT TCGACGCCAT TGTTGAACTC
GACGCCGCCC AGATCATTCC TCAGGTCACC TGGGGAACCT CGCCTGAGAT GGTGCTGGGC
ATTGACGGCC GTGTGCCCGA TCCCGACAAA GAAAAAGACG CCAACAAACG CGGCGCCATC
GAACGCGCAC TGGTCTACAT GGGATTGGAG CCAGGCAAAG CCCTTGACGA CCTGCATGTG
GACAAGGTGT TTATCGGTTC CTGCACCAAC AGCCGGATTG AAGACATCCG TGAGGCCGCC
GCACTGGTTA AAAAATTGGG GCAAAAAGTC GCCAAAAATG TCAAGCTGGC CATGGTGGTT
CCGGGCTCAG GCCTGGTCAA GGAACAGGCG GAGCGCGAAG GCTTGCATGA GATTTTCAAG
GCGGCCGGCT TCGAGTGGCG CGAACCAGGC TGCTCGATGT GCCTGGCCAT GAATGCCGAC
CGGCTGGAGC CCGGTGAGCG CTGCGCGTCC ACCAGCAACC GCAATTTTGA GGGCCGCCAG
GGCGCCGGCG GACGCACGCA CCTGGTCAGC CCCGCCATGG CCGCTGCTGC CGCCATTCAC
GGCCATTTTG TGGACGTCAG GAAGTTTGTC TGA
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| Protein sequence | MDRTKIETHG RTLYDKLWDE HVVHTEEDGT AILYIDRHLV HEVTSPQAFE GLRQAGRKVW
RVSSIVATAD HNTPTTGWDL GYDGITDPTS KEQVVTLDSN MQEFGAAAYF PFMSKRQGIV
HVIGPENGAT LPGMTVVCGD SHTSTHGAFG ALAHGIGTSE VEHVMATQTL LAKKAKNMLI
RVDGTLQRGC SGKDIVLAII GKIGTAGGTG YTIEFGGSAI RALSMEGRMT VCNMAIEAGA
RAGLVAVDEK TIEYVKGRPL APGHNAANDT AAAVEWDQAV AYWKTLHSDA DAHFDAIVEL
DAAQIIPQVT WGTSPEMVLG IDGRVPDPDK EKDANKRGAI ERALVYMGLE PGKALDDLHV
DKVFIGSCTN SRIEDIREAA ALVKKLGQKV AKNVKLAMVV PGSGLVKEQA EREGLHEIFK
AAGFEWREPG CSMCLAMNAD RLEPGERCAS TSNRNFEGRQ GAGGRTHLVS PAMAAAAAIH
GHFVDVRKFV
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