| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1787 |
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| Symbol | trpA |
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| ID | 3963307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1923117 |
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| End bp | 1923938 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916610 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_523047 |
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| Protein GI | 89900576 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA TCGCCCGCAC TTTCGCCGGC CTGAAGGCCC AAGGGCGCAA AGCCCTGATT
CCCTATGTCA CGGCAGGCTT CCCCTTTCCC GATATCACGC CTGAGTTGAT GCACGCGTTT
GTCGCCGGCG GCGCCGATGT GATCGAGCTG GGCGTGCCCT TTTCCGACCC CAGTGCGGAT
GGCCCGGTGA TTCAAAAGGC CGGCGACAAA GCACTGGCCG CGGGCATTGG CATGGTGCAG
GTGCTGGACA TGGTGCGCAC CTTTCGCACC CGGGATGCGA GCACACCGGT GGTGCTGATG
GGCTACGCCA ACCCAGTGGA GCGCTACAAC CAGAAGCATG ACCGCCACGA CGGCAAGAGT
GCTTTTGTGC TTGATGCTGC GGCAGCCGGT GTGGACGGCG TTCTGATCGT CGATTACCCG
CCCGAAGAAT GCGAGGCCTT TGCCGCCGAG CTCAAAAGTG CGGGGCTGGA CCTGATCTTT
TTGCTCGCCC CCACCAGTAC CGACGAGCGC ATGCAGCAGG TCGCGCGGGT GGCCAGTGGC
TATGTGTACT ACGTCTCGCT CAAGGGTGTC ACCGGATCGG GCGCGCTCGA CACCGGTGCC
GTCGAGGCGA TGCTGCCGCG CATCCGGGCC CATGTGCAGG TGCCGGTCGG TGTCGGTTTT
GGCATTCGCG ATGCCGCCAC TGCCCGCACC ATCGGGCAGG TCGCCGATGC GGTGGTCATC
GGGAGCAAAA TCATCCAGTT GATTGATGAA CAGCCGCGGG ACCAGGTGGG CCCGGTAGCG
CAAAAATTTT TATGTGAAAT CCGCACCGCG CTCGATAATT GA
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| Protein sequence | MSRIARTFAG LKAQGRKALI PYVTAGFPFP DITPELMHAF VAGGADVIEL GVPFSDPSAD
GPVIQKAGDK ALAAGIGMVQ VLDMVRTFRT RDASTPVVLM GYANPVERYN QKHDRHDGKS
AFVLDAAAAG VDGVLIVDYP PEECEAFAAE LKSAGLDLIF LLAPTSTDER MQQVARVASG
YVYYVSLKGV TGSGALDTGA VEAMLPRIRA HVQVPVGVGF GIRDAATART IGQVADAVVI
GSKIIQLIDE QPRDQVGPVA QKFLCEIRTA LDN
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