| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1784 |
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| Symbol | lysS |
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| ID | 3963304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1919356 |
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| End bp | 1920918 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916607 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_523044 |
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| Protein GI | 89900573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACC ACCCAAGCAT CCCAGCCCCC GTCGACGAAA ACCAACTGAT CCTGGAGCGA
CGTGACAAGC TCAAAGCCTT GCGCCAGCTG CAGGCCGAGG GCAAGGGCGT CGCCTTCCCC
AACGATTTCA AGCCAAGCGA CCACGCCGCT GATCTGTTTG CCGCCCACGT CGGCCAGACA
CCGGAAGGCC TGATCGAGCA AGGCGCAACG GCCAAAGTCG CCGGGCGCAT GATGCTCAAG
CGCGTCATGG GCAAGGCCAG TTTTGCCACC CTGCAAGACA GCACGGGGCG CATCCAGCTC
TATATCAAGG GGGAAGATGT CGGCGCCGAG GTGTACGCCA GCTTCAAGCA CTGGGATTTG
GGCGACATCG TGGCCGCAGA GGGCAAGATT TTCAAGACAA AAACCGGTGA GCTCTCGATT
CACGCCACCA GCTTGCGACT GCTGACCAAG AGCCTGCGTC CGATGCCCGA CAAGTTTCAC
GGCATGAATG ACCAGGAAAC GAAGTACCGC CAGCGCTATG TCGATTTGAT GATGGATGAG
ACCGCGCGCG CGCGCTTCAC GGCCCGCAGC AAAGCGGTCA GCGGCATCCG CGAGTTCATG
GTGGCGCACG ATTTCCTGGA AGTGGAGACG CCGATGCTGC ACCCCATCCC CGGGGGCGCC
AACGCCAAGC CTTTCACCAC GCACCACAAT GCGCTGGACC AGCAAATGTT CCTGCGTATT
GCACCCGAGC TCTACCTCAA GCGCCTGATC GTGGGCGGTT TCGAGCGCGT GTTCGAGATC
AACCGCAGTT TTCGCAATGA AGGCATCTCG GTGCGCCACA ACCCCGAGTT CACCATGATG
GAGTTCTACG CCGCCTACTG GGACTACCAG GACCTGATGA CTTTCACCGA AAAGCTGATT
CGCGACGCGG CGCAAAAGGC CGTCGGCACC CTGGAGCTGA GCTATGGCGG CCGAGCGGTC
GATTTGACCC AGCCGTTTGA ACGCCTGACG ATTCATGAGG CCATCTGCAA GTTCACCGAA
GCCGGTCAAG AGCTCGAAGG CGCGAACCTC GACGGCTGCC TGAAGGTGGA CAACGCCGCC
TGGCTCATCA GCGCCCTGCG CAAATTGGGC CTGACCGAGG GCAAGCACAA GCTCTCCACC
CGCTCGCTGG CCAGCCTGCA GGTGCTGTAC TTTGAAGAAA CCGTGGAAGA AAAACTGTGG
CAGCCGACCT TCATCTGCGA GCACCCGGTC GAAATCTCGC CGCTGGCCCG CGCCAGCGAC
CACAAACCCG GCGTGACCGA GCGTTTTGAG CTCTACATCA CCGGCCGCGA ATTCGGCAAC
GGATTCAGCG AGCTCAACGA CGCCGAAGAG CAAGCCTCCC GCTTTCACGC CCAGGTGGCG
GCCAAGGACG ACGGCGACGA CGAGGCCATG TACTACGACC ACGACTTCAT TCGCGCGCTG
GAATACGGCA TGCCGCCCAC CGGCGGCTGC GGCGTGGGCC TGGACCGGCT GATGATGCTG
CTGACCGACA GCAGCAGCAT CCGCGACGTG ATCCTGTTCC CGGCACTGCG GCACGAAGTT
TAA
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| Protein sequence | MSDHPSIPAP VDENQLILER RDKLKALRQL QAEGKGVAFP NDFKPSDHAA DLFAAHVGQT
PEGLIEQGAT AKVAGRMMLK RVMGKASFAT LQDSTGRIQL YIKGEDVGAE VYASFKHWDL
GDIVAAEGKI FKTKTGELSI HATSLRLLTK SLRPMPDKFH GMNDQETKYR QRYVDLMMDE
TARARFTARS KAVSGIREFM VAHDFLEVET PMLHPIPGGA NAKPFTTHHN ALDQQMFLRI
APELYLKRLI VGGFERVFEI NRSFRNEGIS VRHNPEFTMM EFYAAYWDYQ DLMTFTEKLI
RDAAQKAVGT LELSYGGRAV DLTQPFERLT IHEAICKFTE AGQELEGANL DGCLKVDNAA
WLISALRKLG LTEGKHKLST RSLASLQVLY FEETVEEKLW QPTFICEHPV EISPLARASD
HKPGVTERFE LYITGREFGN GFSELNDAEE QASRFHAQVA AKDDGDDEAM YYDHDFIRAL
EYGMPPTGGC GVGLDRLMML LTDSSSIRDV ILFPALRHEV
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