| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1768 |
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| Symbol | |
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| ID | 3960859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1901576 |
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| End bp | 1904677 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916591 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_523028 |
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| Protein GI | 89900557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.046039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCA GCGGGAAAAT ACAAGGCAAT GACGACGGCA AGGCAAGCGA TCGATCCGTG
AGTCTGCTCC CAAACCAGGA GTTGCGACAC AAGCATCCAG CCTGGAATAG GCTGCTGAAC
CTGCTGGATC GGTTCTACGC AAAGCTGGCG CATTCCGAAC ACAAGGGACT GTACCGTTAT
CTGCTGACGC TTGTTCTCTC GGTTGTTGCT CTATTTGCCC GCATGGTCAT TGCACCGGAA
GATGCCGGAC TGCAATTCAT CACCTTTTTT CCCGCTGTCG CAATCTCCGC GGTGCTTTTT
GGCACCGGGC CAGGGCTATT CACCACCTTC ATCGGCGCCA CGATGGGCAC CTATTTCTTC
TTCCCCCCTT ACGAGGCGTT TGTATTCGAA TTTCAACATC ACACACTGAT ATCCGTGGTG
ATTTTTTGCG CCGATGGATT GATCGTGAGT CTCTCGATCG GCGCGATGCG CCGCTATTTT
TCCAATTACG TCATCACGGT TGCCAAGCTC GAAACAGCAC TGGAGCAGAG TCGGCACAAT
GAAGCCGAAT TGACGTATCA AAAATACGCA TTGGATCAAC ATGCGATTGT TGCTGCCACT
GACGTACGCG GCACAATTAC TTATGTCAAT GATCTGTTCT GCGCGATAAG CCAGTATTCC
CGTGACGAAC TGCTTGGACA TAACCATCGG CTGCTCAATT CCGGCGCACA TCCAAAAGAA
TTTTTCGAGG CCATGTATCG CACCATCTCC AGCGGCGAGG TCTGGAAAGG TGACATCTGC
AACCGCGCCA AGGATGGCTC CCTGTATTGG GTGTCGACCA CCATCGTGCC CTATGTCAAT
GACAGCGGTA AACCAATCAG GTATGTTGCG ATCCGCGCCG ACATCACCGA GCGCAAACGT
GCCAAGGAAG CCGCCCAGGC TGCCACACTC GCCAAGTCGC AATTCCTGGC CAACATGAGC
CACGAGATTC GCACCCCGAT GAACGCCGTC CTGGGGTTGA CCCGCATGGT GCTGGAGTCG
GACCTGAAGC CGGAGCAACG GGAGCAGCTC ATCAAGGTCA GCAAGTCCGG CCGGGCCTTG
GTGCGCATCA TCAACGACAT CCTGGACTTT TCGAGAATCG AGGCCGGGCG CTTGGCGATC
GAGCGGATCC CCCTGCGCGT GGAGGCGGTG CTCCTGGAAG TCGCCGACCT GTTCAGCGCC
CAGGCCGAAG AGAAGGGGCT GGAACTGTTC CTCGACATCG AACCCGAGAC CCCGCTGCAG
GTGATAGGCG ACCCGCTACG CCTGACCCAG GTGCTCAATA ATCTGGTCGG CAACGCCATC
AAGTTCACCG ATCACGGCGA GATTCATATC GGCGTGCGGG TCGCGCACTA TGGCGATGCC
ACGCTGACCC TGTGCATCAA CGTGCGCGAT ACCGGCATCG GCATGGCACC GGAACAGATC
GGCGTCCTGT TCCAATCCTT CACACAGGCC GATTCCAGCA CGACGCGCAA CTACGGCGGC
AGCGGGCTTG GGCTGACCAT CGCCAAGAAG CTGGTGGAGT TGATGGGCGG CCAGATCACG
CTGGACAGCG CGGTCGGCCA GGGGACGAAC GTCAGCTTCA GCGTCGCAGT CGGCATGGCG
CCGGACGACT TTCGCCGCGT CACCCACATG GGTCAGGACT TGCAGCAGAT GCACGGCAAG
CGCGTGCTGG TGGTGGACGA CCAGGCGACG TCGCGCCAGA TCCTGTCGCG CCTGCTGCAG
GCCTGGGGGA TGGAAGCGAC CGAGGCAGAA AGCGGACCGC AAGCGCTGGC CCGGGTCGCC
GAGGCGAACC GGGCGGGACG GCCGTTCCAT GCCGTATTGC TGGATTGGCG CATGCCCGGC
ATGAGCGGCC TGGAGGTGGC GACCGCGCTG AAGGCACAGG ACGAAGCGAA GGGACTCCCG
ACACCTTTGC AGGTGTTGAT GGTGACCGCC TACGACAAAC AATCGCTGCT GCAAGAACCC
GAAGCCGCCA ACATCGACGG GGTTCTCACC AAACCGGTGG TGCCTTCCTA CTTGTTCGAT
GCCTTGCTGC AGGGCGAACC CCGCCACCCG GATGCATCGG ATGAACTTGT TGCCCAGAGA
TTCGATGGTG TTCGCGTGTT GTTGGTCGAG GACAATGACC TTAACCAGGA GGTCGCATCC
AGTTTCTTGA GAAAACGCGG CGTGTCCGTT ACCGTTGCCT GGCATGGTGG CGAAGCCGTG
GAACTGATTC AACACCAGCA GTTTGACCTC GTGTTGATGG ATCTGCACAT GCCGGTTATG
GGCGGTATCG AAGCCGCACG TCGAATTCGC GAACTGCCGC AGGGGAAAAA CCTGCCGATC
GTGGCCATGA CGGCGGCGGT CATGGAAGAA GACAGGGCGC GGTGTAGAGC AGCCGGCATG
AATGGCTTCG TCGCCAAACC GGTGGAGCCC GAAGATCTGG CGCGGGTGCT CGTCATGTAC
ACCCGGCCGG GGACGCAGAC GCCGCCCGCC ACCACGCCGA CCATTCAGGC GGGCGAGCCG
GTGCTCGATC TGGTGAAAGG CCTGCGCCGC CTGGACGGCG ACCGTGCACT GCAGCAACGC
CTGCTGCTGG GGTTCGTTGA GCGCCATCAC GACATCGTCG GGCGCCTGGA CGCACTGCTG
GCGGAAAAAA ACACGACCGA AGCCGTCGAT TTGATCCATA CCCTCAAAGG CGTTGCCGCC
AATCTGGGCG CGGTGGCGCT GGCCGAGGCC AGCCGCCGCT TGATCGAAGA ACTGAGGTCG
GCGACGCCAC TGGCCTCTCG CTTCGCTTTC CATACAACCC TGGTCGAGAC GCTCACGCAG
ATGCAGCAAC ATATCGCCGG CCACGTCCAA ACCGACCTGG CCGAGGCGGC GGCGGTAGAG
CCTGTCTCGC TGGAACACAC CTTGCTGGCG CTGGAGCCCT TCATCGTCGG CCAGGAAGTG
ATTCCCGACG CCTTGCTGGT CGCCTTGCAG CGGATTAGCA CCGCCGATTT GCCATATTCA
CCGCTGGCGC GGCAGTTGCG GCATCACCTT GACAACTTCG AACATGGCGA GGTCCTGGAG
GCGTTCAAGC TGTTGCGGGT AGAACAGGCG GTACAAGGAT GA
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| Protein sequence | MNTSGKIQGN DDGKASDRSV SLLPNQELRH KHPAWNRLLN LLDRFYAKLA HSEHKGLYRY
LLTLVLSVVA LFARMVIAPE DAGLQFITFF PAVAISAVLF GTGPGLFTTF IGATMGTYFF
FPPYEAFVFE FQHHTLISVV IFCADGLIVS LSIGAMRRYF SNYVITVAKL ETALEQSRHN
EAELTYQKYA LDQHAIVAAT DVRGTITYVN DLFCAISQYS RDELLGHNHR LLNSGAHPKE
FFEAMYRTIS SGEVWKGDIC NRAKDGSLYW VSTTIVPYVN DSGKPIRYVA IRADITERKR
AKEAAQAATL AKSQFLANMS HEIRTPMNAV LGLTRMVLES DLKPEQREQL IKVSKSGRAL
VRIINDILDF SRIEAGRLAI ERIPLRVEAV LLEVADLFSA QAEEKGLELF LDIEPETPLQ
VIGDPLRLTQ VLNNLVGNAI KFTDHGEIHI GVRVAHYGDA TLTLCINVRD TGIGMAPEQI
GVLFQSFTQA DSSTTRNYGG SGLGLTIAKK LVELMGGQIT LDSAVGQGTN VSFSVAVGMA
PDDFRRVTHM GQDLQQMHGK RVLVVDDQAT SRQILSRLLQ AWGMEATEAE SGPQALARVA
EANRAGRPFH AVLLDWRMPG MSGLEVATAL KAQDEAKGLP TPLQVLMVTA YDKQSLLQEP
EAANIDGVLT KPVVPSYLFD ALLQGEPRHP DASDELVAQR FDGVRVLLVE DNDLNQEVAS
SFLRKRGVSV TVAWHGGEAV ELIQHQQFDL VLMDLHMPVM GGIEAARRIR ELPQGKNLPI
VAMTAAVMEE DRARCRAAGM NGFVAKPVEP EDLARVLVMY TRPGTQTPPA TTPTIQAGEP
VLDLVKGLRR LDGDRALQQR LLLGFVERHH DIVGRLDALL AEKNTTEAVD LIHTLKGVAA
NLGAVALAEA SRRLIEELRS ATPLASRFAF HTTLVETLTQ MQQHIAGHVQ TDLAEAAAVE
PVSLEHTLLA LEPFIVGQEV IPDALLVALQ RISTADLPYS PLARQLRHHL DNFEHGEVLE
AFKLLRVEQA VQG
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