Gene Rfer_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1766 
Symbol 
ID3960857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1898448 
End bp1899038 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID637916589 
ProductTetR family transcriptional regulator 
Protein accessionYP_523026 
Protein GI89900555 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0390977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTATC CCGCCGACCA AAAGGCCGAA ACACACAAGC AGATCGTGGA CATCGCCGCC 
AGGGAGTTCC GTAGCAAGGG ACTGCAGGGG ATCGGCATCT CCAATCTCAT GTCGCAGGTG 
GGCCTGACAC ACGGGGGCTT CTATGCCCAC TTCAAGGACC GGGATGCGCT GGTGGAAGAG 
GCGGCGGTTT GCGCCGCGAA CCATGGTTTT CAGCAACTGA TGGCGGCGGC CCAAGCGGCC 
AAGCCCGGCA AGGAAGTGGC TGCCATGCTG GACTATTACC TGAGCCCTGC GCACCGGGAT 
GAGCCGGGTT TTGGCTGTGT GCTCCCCGCG CTGGCAGCCG AGATTGCCGG GCAGGCGGAC 
TCCGTGCGCG ACGCCTTTAC CCAGGCAGCC AAGCAGAACC TGAACCAGAT GGCCCGTTAC 
ATGCCCGGTG CCAGTGAGAA GAGCCGGCTC ACGCAGGCCA TGGTGCTTCT CTCCAGCATG 
GCCGGAGGCG TGTTGGTCGC GCGGGCCGTC AACGACCCCA AGCTCAGCAA GTTATTGCTC 
GATTCGGTTC GCACCCAGCT GTTGCATTTG TACGGCACGT GGCTGGACTG A
 
Protein sequence
MRYPADQKAE THKQIVDIAA REFRSKGLQG IGISNLMSQV GLTHGGFYAH FKDRDALVEE 
AAVCAANHGF QQLMAAAQAA KPGKEVAAML DYYLSPAHRD EPGFGCVLPA LAAEIAGQAD 
SVRDAFTQAA KQNLNQMARY MPGASEKSRL TQAMVLLSSM AGGVLVARAV NDPKLSKLLL 
DSVRTQLLHL YGTWLD