| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1752 |
|---|
| Symbol | |
|---|
| ID | 3962453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1886855 |
|---|
| End bp | 1887613 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637916575 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_523012 |
|---|
| Protein GI | 89900541 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.736096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA AGCTTTCAGT CAACCTCAAC AAAGTGGCGC TGGTGCGCAA CACGCGCCAC
CTGGGCATCC CCAGCGTGAC GCGGGCGGCC ACCTTGTGCC TGCAGGCCGG TGCCAATGGC
ATCACGGTGC ATCCTCGGCC GGACGAGCGC CATATCCGCA CCGACGATGT GCGGGACTTG
GCGCTGTTGA TGCAAGCCTG GCCGGATCGT GAATTCAATA TCGAAGGCAA CCCGCTGCAC
AATTTGATGG ACGTGGTGCA TGGTCTGGTT GAGAAAAAAC TGCCGGTGCA CCAGGTGACC
TTTGTGCCCG ATTCAGAGGG TCAATTCACC AGCGACCATG GCTGGAATTT CCCTGGCGAT
GCCAGTCGTC TGCGACCGTT GATTGCGCAA GCCCATGCGT GGGGCTTGCG CGTCAGCCTG
TTCATGGATG CCGACCCGGC CGCCATGGCC GGGGCCCAAG CGGTCGGGGC CGACCGGGTC
GAGCTCTACA CCGAGCCTTA TGCCGCCGCT TGGGGCACAG CGCAGCAGAC CCCTCAACTG
GCGCGCTTTG CCGAGACCGC ACGCGCGGCA CTCAAGCTGG GTTTGGGCGT CAACGCCGGC
CATGACCTGA ACCGCGACAA CCTCAGCGCT TTCATTCAAG CCGTGCCAGG CGTCGCAGAA
GTTTCCATCG GCCACGCGCT GATTGCCGAC GCGCTGGAGC TGGGCTACAG CGCCACGGTG
CAGGCTTACC TGCGCTGCAT CGCCCAGGGT CGCTCGTGA
|
|---|
| Protein sequence | MTTKLSVNLN KVALVRNTRH LGIPSVTRAA TLCLQAGANG ITVHPRPDER HIRTDDVRDL
ALLMQAWPDR EFNIEGNPLH NLMDVVHGLV EKKLPVHQVT FVPDSEGQFT SDHGWNFPGD
ASRLRPLIAQ AHAWGLRVSL FMDADPAAMA GAQAVGADRV ELYTEPYAAA WGTAQQTPQL
ARFAETARAA LKLGLGVNAG HDLNRDNLSA FIQAVPGVAE VSIGHALIAD ALELGYSATV
QAYLRCIAQG RS
|
|---|
| |