| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1739 |
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| Symbol | |
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| ID | 3962440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1874317 |
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| End bp | 1875798 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916562 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_522999 |
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| Protein GI | 89900528 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0778272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCATA TCGATTGGAA GAAGTTGCAT TCTTTTGTTC TCGCCAGTGC TTTTGCTTTG
ACGGCGTCGG TCGTTCTGGT GCCCGTGTCG CAGGCGATGG CTCAGGTGCG CACCTTGCCG
GACTTTACCG ACCTGGTGGA GCAAGTGGGG CCATCGGTGG TGAACATTCG CACGCTTGAA
AAGGTGACAC CATCTGACGG TTCCGGTGGT GTGGACGAAC AAATGCTGGA GTTTTTCCGT
CGTTTCGGGT TGCCGATTCC GAATATGCCC AATGTTCCGA AAAATCCGCA CCAGACGCCG
CCCAAGAATC ATCCGCCGAT ACCAGAAGAC TCGCAGCCGC GTGGCGTCGG TTCCGGCTTC
ATCCTGTCGG CGGACGGTCT CATCATGACC AATGCCCACG TCGTCGATGG CGCTGACGAG
GTGTTGGTGA CGCTGACTGA CAAACGCGAG TTCAAGGCCA AAATCATTGG TGCGGACAAG
CGCAGTGATA TTGCGCTGGT CAAGATCGAG GCCGTTGGCC TGCCAGCTGT CAAAGTGGGT
GATGTGGGTC GACTCAAAGT TGGCGAATGG GTGATGGCGA TCGGGTCACC GTTCGGCTTG
GACAACACCG TGACGGCCGG TATTGTGAGT GCCAAGCAGC GCGACACGGG CGACTATCTG
CCCTTCATTC AGACCGATGT GGCTATCAAT CCTGGCAATT CGGGCGGCCC CTTGATCAAC
ATGCGCGGCG AAGTGGTGGG CGTCAACAGC CAGATTTATT CGCGCTCGGG TGGCTCTATG
GGCATCTCGT TTGCCATTCC GATGGACGAA GCGTTTCGCG TCAGCGAGCA GTTGCGCGTG
TTGGGTCGGG TCTCGCGCGG GCGCATCGGT GTGCAAATTG ACCAGGTGAC CAAAGAGGTG
GCGGAGTCCA TCGGTTTGGG CAAGGCCCAG GGGGCGCTGG TACGCGGCGT CGAGACTGGA
TCGCCGGCCG AGAAAGCAGG CGTGGAAGCA GGCGACATCA TTATCAAGTT TGAAGGGAAG
GTGGTCGAGA AGTCCAGTGA CTTGCCGCGC ATGGTGGGTA GCACCAAGCC GGGTACCCGA
AGCAGCCTGA CTGTGTTTCG TCGTGGCAGC CAGAAAGAGT TAACGGTCAC CATCGCGGAG
ATTGAAGCAG ACAAAGTCCC AGCCAAAGCG GTTGAGAAGG TGGAAAAACC CAAAGCATCC
AGTGCAGGGC AGGCGCTTGG ATTGGCTGTC GCCGAATTGA CTGATGCGCA AAAGAAAGAG
CTCAAGGTCA AAGGTGGCGT GAAGGTCGAA GCCGCCACCG ATGCGGCTGC CCGCGCCGGT
ATCCGTGAGG GAGATGTGAT TGTGGCTGTT GCCAATGTGG CGATTACCAA CATCAAGGAA
TTCGAAAGTG CGCTGGCAAA GCTTGACAAG AACAAAGCAG TCAGCGTTCT TTTGCGGCGT
GGCGAATGGG CGCAATATGC GGTGATTCGA CCGGCGCGTT AG
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| Protein sequence | MIHIDWKKLH SFVLASAFAL TASVVLVPVS QAMAQVRTLP DFTDLVEQVG PSVVNIRTLE
KVTPSDGSGG VDEQMLEFFR RFGLPIPNMP NVPKNPHQTP PKNHPPIPED SQPRGVGSGF
ILSADGLIMT NAHVVDGADE VLVTLTDKRE FKAKIIGADK RSDIALVKIE AVGLPAVKVG
DVGRLKVGEW VMAIGSPFGL DNTVTAGIVS AKQRDTGDYL PFIQTDVAIN PGNSGGPLIN
MRGEVVGVNS QIYSRSGGSM GISFAIPMDE AFRVSEQLRV LGRVSRGRIG VQIDQVTKEV
AESIGLGKAQ GALVRGVETG SPAEKAGVEA GDIIIKFEGK VVEKSSDLPR MVGSTKPGTR
SSLTVFRRGS QKELTVTIAE IEADKVPAKA VEKVEKPKAS SAGQALGLAV AELTDAQKKE
LKVKGGVKVE AATDAAARAG IREGDVIVAV ANVAITNIKE FESALAKLDK NKAVSVLLRR
GEWAQYAVIR PAR
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