| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1736 |
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| Symbol | |
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| ID | 3964035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1871901 |
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| End bp | 1872548 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637916559 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_522996 |
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| Protein GI | 89900525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGCGCAG ACTCCACAAA ACCCACCTTG CCAGCGCTGA CCGGGGCCAC TGACAGCGAC
CTGATGCTGG TGGAGCGCGC TGTCGCAGGT GATCAGAACG CCTACGAATT GCTTGTGATC
AAGTACCAGC GCCGGATTCA ACGCCTGATT GGCCGCATGG TGCGTGATGT GGATTTGGTG
GAAGACATTG CCCAAGAGAC TTTCATTCGG GCCTATCAGG CCTTGCACCA GTTTCGCGGG
GATGCCCAGT TTTACACCTG GCTGTACCGC ATTGCGGTCA ACACGGCCAA AAAATTCTTG
ATGGAACTCA AGCGTGACCC CACGGTGTCG GAGAACGCCT TTAAATCAGA TGATGAGGGT
GATGAAACTT CTTGGGCTGG AAATGAACCA ATTGACAGTG AGACGCCGGA GTCGGTGCTG
GCTGCCAAGG AGGTTGCCAT GGCGGTAGAT GCCGCGCTCG AGGCTTTGCC AGAGGATTTG
CGGCAAGCGT TGACTCTGCG CGAAATTGAA GGCTTGAGCT ATGAAGAGAT TTCGGAAGTG
ATGGATTGCC CGATTGGTAC CGTTCGTTCC CGGATTTTCC GTGCTCGGGA AGCGATATCG
GACATTGTGA AACCAATGCT GGAAAGACAG ACCAGCAAAC GCTGGTAA
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| Protein sequence | MSADSTKPTL PALTGATDSD LMLVERAVAG DQNAYELLVI KYQRRIQRLI GRMVRDVDLV
EDIAQETFIR AYQALHQFRG DAQFYTWLYR IAVNTAKKFL MELKRDPTVS ENAFKSDDEG
DETSWAGNEP IDSETPESVL AAKEVAMAVD AALEALPEDL RQALTLREIE GLSYEEISEV
MDCPIGTVRS RIFRAREAIS DIVKPMLERQ TSKRW
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