| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1720 |
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| Symbol | |
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| ID | 3964019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1856782 |
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| End bp | 1859805 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916543 |
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| Product | ribonuclease |
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| Protein accession | YP_522980 |
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| Protein GI | 89900509 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGA TGCTGATTAA CGCCACGCAG GCTGAAGAAC GCCGCCTGGC CATTGTCGAC
GGACAAAAAC TCCTCGACTA CGAGATTGAA ATCGAAGGTT GCGAACAACG CAAGGGCAAC
ATCTACAAGG CCGTCGTCAC CCGCGTCGAG CCGTCGCTGG AAGCCTGTTT TGTCGATTAC
GGTGAAGACC GTCATGGCTT TCTGCCATTC AAGGAAATTT CCCGGCAGTA TTTTCAACCC
GGCGTGGCCG TCGGCCAGGC ACGCATCCAG GATGCCATCC GTGAAGGCCA GGAACTGCTG
GTGCAAGTGG AAAAGGAAGA GCGCGGCAAC AAAGGCGCTG CCCTGACCAC CTTCGTGTCG
CTCGCTGGCC GCTACGTGGT GCTGATGCCC AATAACCCAC GCGGAGGCGG TGTCTCACGC
CGCATTGAAG GCGAAGACCG GGCCGACCTG AAAGAGGCCC TCGATCAGCT TGAATACCCC
AACGGGATGA GCATCATTGC CCGCACCGCC GGCATTGGCC GCAGTGCGCC CGAGTTGCAA
TGGGACCTGA ACTACCTGCT TAAATTGTGG GCCGCCATTG ATGGCGCCGC CAAGGGTGCC
AAGGGCGCCT TCCTGATTTA CCAGGAATCG TCTTTGGTGA TCCGCGCCAT TCGTGATTAC
TTCAACAACG ACATCGGCGA CATCCTGATC GACACCGACG ACGTGTTTGA CCAGGCCCAG
CAATTCATGG CCCACGTGAT GCCCGAGCAC GCCGACCGCG TCAAGCGCTA CCGCGATGAT
GCACCGCTGT TCAGCCGTTT CCAGATCGAG CACCAGATCG AATCGGCCTA CGCCCGCACC
GTGCAATTGC CCAGCGGCGG CGCCATTGTG ATTGACCACA CCGAAGCGCT GGTGTCGGTG
GACGTCAACT CGGCACGCGC CATCAAAGGC AGCGACATCG AAGAAACTGC CACCCGCACC
AATTTGGAAG CGGCTGAAGA AGTGGCACGC CAGATGCGCC TGCGGGACTT GGGTGGCCTG
ATCGTGATCG ACTTTATCGA CATGGAAGAA AGCCGCAACC GCCGCGACGT GGAAAACCGC
CTGCGTGACT CGCTGCGGCA AGACCGCGCC CGTGTGCAGT TTGCCACCAT CAGCAAATTT
GGTCTGATGG AGATGAGCCG CCAGCGGCTG CGCCCCGCCT TGTCAGAGGG CGCCTCCATT
CCCTGCCCGC GTTGCGGCGG CTCCGGCCAC ATCCGTGACA CGGAATCCAG TGCATTGCAG
ATCTTGCGCA TCATCCAGGA AGAGTCTCTG AAAGACAACA CGGCTTCGGT GCTGTGCCAG
GTCCCGGTTG AGGTTGCCTC CTTCTTGCTT AATGAAAAAC GGGCCGAGAT TGCAAAAATT
GAACTCAAGC AACGCATCAA CGTCCTGATG GTGCCCAACA AGACACTGGA AACCCCCAAC
TACAAGCTGG AGCGTCTCAA GCATGACGAC CCGCGCCTGG ACAACATCGA ATCCAGCTAC
AAGTTGGCCG ATCAGATGGA AGACGCCACG GCGGTGACAC GCCGCTCGCA GGAACCCACC
AACAAGCAGA CGCCGATCAT CAAAGGCGTT TTGCCCGATG CCCCGGCGCC TGTTGCACCG
CCCCGGCCCG AGCCCGTCAA GCCAGCGGTC GCCGCGCGCA CGGCACCCAG GCCCGTACCT
GCATCCGTGG CCCCAGTGCC ACCGGTAGAA GGTGGTTTCT TTGGCTGGCT CAAGCGGCTG
TTTGCGCCCG AAGCAACGCC TGTTGTCCCC GCGCAACCCA AGGCAGACTC GGCCCAGGCC
GACAAGCGCG AAGAACGCCC GAGCCGCGAA GGCGCCCGTC GTGGCGAACC CCGAAGCGAC
GGTCGCGACG AAGGTCGTGG CGGCAGAGGT GGCCGCGGCG GACGTGGTGA CGGACGTGGT
GACGGACGTG GTGACGGACG TGGTGACGGA CGTGGTGACG GACGTGGCGG CAGAACCGGT
CGCGGTGAGC GTCCAGCGTC TGGCCCGCGT GAGCGTTTCG ACGGCGAAGG CAGACCCGCC
GCGATGGATA CGGGCGCCAG CCAAGTGCAG ACGTCACTCA ACGGGACAGG CCAGGAAGCA
TCCCGGACGG AACCAGGGCA AGAGCGCCCA GCGCGCAATT CGGAACGGGG TGGCCGTGGC
GGCCGCGGTG GTCGCGGCCG CAGCGAGCGA GTCGACGGCG TCGAGTCAAC CAGTCCCGCT
GAACGCGAAG AGCTCCGGCC CGACCTGCGC AACGAGCGTC GTCCCGAACG CAACCGTCGG
CCTGACGCCA ACGTTGCTAA CGTCCCCAGC GACGCGTTCA ACCAAGAGTC CAACCGCACC
GATGTCTTAT TAGCCGTCTC GCGCGAGAAT GTTGCCGACC TCGAACCAGG CCTTGCCGCT
CAGGCGACGG AGCGTCCCGA GGGCACGCCA ACGCGTGAAA AGCGCAGCCG TGACCGCTAT
GGCCGGGATC GTGCACCTCG CGGTGAGCGC CCCGAACAAG GGGAGCGTCA GGACCAGCCA
TCGCGCGACA GCCAGCCTTC AGCAGAACCG TCGGCGCAAG AGCCCCGCAA GTCCTACTTT
ACGGCCAGCC CTGAAGCAGC CGCGACCCCG GCGGAACCGA CCCCGGTTGC GGCAACGCCA
GCCGCAGCGC CGGCAGCAAT CCCTGTCGCT GTGTCATCTG CCGCGCCGGA GCCCGTGGCA
ACACCGGTCA CCGTGTCCAT GGTCGCGGCC CCAGCGGCTG AGCCTGTGGC AGCGGCAGCA
GCCATGCCCA GGCTTGAGCA GTTTGAGTTG CCACTGGGCG AGTTGGTCCA GGTGGCCCAG
AGCTCCGGCC TGAGCTGGGT CAACTCAGAC CCTGAAAAGA TTGCAGCGGT CCAGGCGGCC
ATCGCGGCCG AACCAAAACC AGTTCACGTG CCCCGTGAAC GCCCTGCAGT GGTAAAAGTT
GAGGGTGGAC CACTGGTTTT AGTGGAAACC AAACGCGATT TGCGTAACAT GACGCTGCCC
TTTGAAGAAA AGGAACCTCA GTAA
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| Protein sequence | MKRMLINATQ AEERRLAIVD GQKLLDYEIE IEGCEQRKGN IYKAVVTRVE PSLEACFVDY
GEDRHGFLPF KEISRQYFQP GVAVGQARIQ DAIREGQELL VQVEKEERGN KGAALTTFVS
LAGRYVVLMP NNPRGGGVSR RIEGEDRADL KEALDQLEYP NGMSIIARTA GIGRSAPELQ
WDLNYLLKLW AAIDGAAKGA KGAFLIYQES SLVIRAIRDY FNNDIGDILI DTDDVFDQAQ
QFMAHVMPEH ADRVKRYRDD APLFSRFQIE HQIESAYART VQLPSGGAIV IDHTEALVSV
DVNSARAIKG SDIEETATRT NLEAAEEVAR QMRLRDLGGL IVIDFIDMEE SRNRRDVENR
LRDSLRQDRA RVQFATISKF GLMEMSRQRL RPALSEGASI PCPRCGGSGH IRDTESSALQ
ILRIIQEESL KDNTASVLCQ VPVEVASFLL NEKRAEIAKI ELKQRINVLM VPNKTLETPN
YKLERLKHDD PRLDNIESSY KLADQMEDAT AVTRRSQEPT NKQTPIIKGV LPDAPAPVAP
PRPEPVKPAV AARTAPRPVP ASVAPVPPVE GGFFGWLKRL FAPEATPVVP AQPKADSAQA
DKREERPSRE GARRGEPRSD GRDEGRGGRG GRGGRGDGRG DGRGDGRGDG RGDGRGGRTG
RGERPASGPR ERFDGEGRPA AMDTGASQVQ TSLNGTGQEA SRTEPGQERP ARNSERGGRG
GRGGRGRSER VDGVESTSPA EREELRPDLR NERRPERNRR PDANVANVPS DAFNQESNRT
DVLLAVSREN VADLEPGLAA QATERPEGTP TREKRSRDRY GRDRAPRGER PEQGERQDQP
SRDSQPSAEP SAQEPRKSYF TASPEAAATP AEPTPVAATP AAAPAAIPVA VSSAAPEPVA
TPVTVSMVAA PAAEPVAAAA AMPRLEQFEL PLGELVQVAQ SSGLSWVNSD PEKIAAVQAA
IAAEPKPVHV PRERPAVVKV EGGPLVLVET KRDLRNMTLP FEEKEPQ
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