| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1718 |
|---|
| Symbol | |
|---|
| ID | 3964017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1854311 |
|---|
| End bp | 1855600 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637916541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522978 |
|---|
| Protein GI | 89900507 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCTG CCCTGTGGTT TTTGGGATTG TTTGGTGTGG CGGTGGCCAT GGCCTTGTTT
GTCGGTAATA ACCAGGGCAC CATCACGATT TTCTGGCCAC CCTACCGGGT TGATCTGTCG
TTCAATCTGG TGGTGCTGTT GTTGGCCTTG TTCTTTTTGG GTTTGCATGT GGCCTTGCGT
GCGTTGGCCG CCTTGTTTGC CATGCCGGGC CACGCGCGCA GCTGGCGCAT CCAGCATCAG
GAGCGTGCCA TGCACGTCGC TTTGCTCGAT GCCCTGTCGC ACATGATGGC GGGGCGTTTT
ATTCGGGCCA GAAAAGCGGC TGAGGTGGTG CTGGCGCGGG AAAGTGCCAT GACCCGCAGT
GGCGAAACAC TGGCTTATTC GGCTCGCCTG CGTGCGCTGT CGCACTTATT GGCTGCCGAA
AGCGCCCAGT CGCTGCAGGA CAAGGTGGCG CGGGAGGATC ATCTGCGCCA ATCGCTCGAA
CAGGCGTCAA GACGCGATGC GCAGGAAACC CGTGAAGGGG TGCAACTGCG GGCAGCCCGT
TGGGCGCTGG AAGACCACGA TGCCCAAAGC GCGCTGCAGT GGCTGAACGA TCTGCCGCAA
GGCGCCTCCC GGCGCACCCT GGCCCTGCGT CTGCGCTTGC AGGCTGCGCG GATGGCACGC
CAGACGCAGC TGGCGCTGGA AACTGCCCGC TTGCTGGCCA AACATCGTGC ATTTTCCGAC
GTCGCGGCAC CCGGAATCTT GCGCAGTCTG GCGCTAGACC TGGTGCTGAC CGCGTATGAC
CCGGATCAGC TGCAAACGGT GTGGCGTCAA CTCGACGAGG CAGAACGCCT GATGCCCGAG
GTCGCCATTG AGGCCAGCAG CCGGATGCTG AAAGTGGGCG GCGATATCGA GCTGGCCCGC
AACTGGCTGC TGCCGGTCTG GGATCACATG CTGGCACAGC CGGGAGCATT GACAGAAGCC
CAGCGCATCA GTCTCATTCG GGCATTGGAA AGCAGCTTTG CAATGGCGTC CGGTGCACCA
GAAGCGCCCT GGCTGACCCG CATCGAACAG GCCCAACTGG CTGATCCAGC CGACGCAAAT
CTGCAATATC TCGCGGGCAT GACCTGTATG CGACTGCAGC TGTGGGGCAA AGCCCAGCAG
TTGTTGCAAC ACGCACTGCC CAAGTTGCAG GACGCCGGTC TGGCCAGAAA CGCCTGGGCC
GCGTTGGCCG ACTTGGCGGA TCAACGGGGC GACGTAGTGG CGGCCACGCA AGCCTGGAAA
AACGCGGCCA AGGCGGCAGC AAGCGCGTGA
|
|---|
| Protein sequence | MRAALWFLGL FGVAVAMALF VGNNQGTITI FWPPYRVDLS FNLVVLLLAL FFLGLHVALR
ALAALFAMPG HARSWRIQHQ ERAMHVALLD ALSHMMAGRF IRARKAAEVV LARESAMTRS
GETLAYSARL RALSHLLAAE SAQSLQDKVA REDHLRQSLE QASRRDAQET REGVQLRAAR
WALEDHDAQS ALQWLNDLPQ GASRRTLALR LRLQAARMAR QTQLALETAR LLAKHRAFSD
VAAPGILRSL ALDLVLTAYD PDQLQTVWRQ LDEAERLMPE VAIEASSRML KVGGDIELAR
NWLLPVWDHM LAQPGALTEA QRISLIRALE SSFAMASGAP EAPWLTRIEQ AQLADPADAN
LQYLAGMTCM RLQLWGKAQQ LLQHALPKLQ DAGLARNAWA ALADLADQRG DVVAATQAWK
NAAKAAASA
|
|---|
| |