Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1714 |
Symbol | |
ID | 3962512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1848383 |
End bp | 1851256 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637916537 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_522974 |
Protein GI | 89900503 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.686661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAC CTCAAAAAGT CGCGCCCACC CAGCGCATCC AGGACAACGA ACGCCCCCTG GTCGATGACA TCCGCCTGTT GGGCCGGATT CTGGGCGATG TCATCCGCGA GCAGGAAGGC GTTGCCGCCT ATGAGCTGAT CGAAGAGATC CGCCAGCTCT CGGTGGCGTT TCGCCGTGAC GCCGACCACG ACGCCGACAA GGCGCTGAAG AAATTGCTCA AGGGACTGAG CAGCGACCAG GCCGTCAGCG TGACCCGCGC TTTCACTTAT TTCAGCCACC TCGCCAACCT GGCGGAAGAT CGACACCACA TTCGCCGCCG GGCTATCCAC GAGCGTGCTG GCGACACCCA GGAAGGCAGC ATTGAAGTGG CCATGGCCCG CTTGCATGCG GCAGGAATAA CACCTGAATC AATCGCGTCA TCACTGGCCA GCAGTTATCT GTCGCCAGTG CTCACGGCGC ACCCGACCGA GGTCCAGCGC AAGAGCATTC TGGACGCGGA GCGCGACATT GCCCAGTTGC TGACCGCACG CGATGAAATC AAAGTCAACG CTGCCGCACA CCGTAGCGTG AACACCAAAA AAGACGCCCT GACGCCACGC GAACTGCTGC TCAACGAGCA GCAAATGAAA GCACGCGTGC TGCAACTGTG GCAAACCCGG CTGCTGCGTT CTTCCAAGCT CACGGTGGCC GATGAAGTGG AAAACGCCCT GAGCTACTAC GAAACCACTT TCCTGAGCGA GATTCCCAGA CTCTACACAG AACTGGAACG CGAACTGGGC CCAAACCCGG TGCACAGCTT TTTGCGCATG GGGCAATGGA TCGGCGGCGA CCGCGATGGC AACCCCCACG TCAACGCACA AACCCTGGCC CACGCCCTGC GCCGCCAGGC TGACGTGGCA CTGCGCCACT ACCTGACCGA GGTGCATTAC CTGGGCGGCG AGTTGTCGCT CTCGGCCATG CTGGTGAACT GCCTGGCGCC CATGCAAGCC CTGGCCGAGC GCTCGCCCGA CAGCAATGAA CACCGCAAGG ACGAGCCCTA CCGGCGGGCC CTGATCGGCG TCTATGCCCG CCTGGCCGCC GTGCTCAAGG ACCTGACCGG GGGCGAGGCA GCGCGCCATG CGGTGGCGCC ACAAAACGCC TATGCCAATG CGGAAGAATT TCTGGCCGAC CTGCGCATCA TCGAAGCCTC TCTGCTGGCG CACCATGGTG AAGCCTTGGT GGCGCAGCGA CTGCACCCGC TGATCCGGGC GGTCGAGGTG TTTGGTTTTC ATCTGGCTAC GGTCGATTTG CGCCAGAGCT CGGATCAGCA TGAAGCGGTG ATGGCGGAAC TGCTGGCGGT GGCGCGGCTG GAAAGCGCTT ACCCCCAGCT CGACGAAATG GCCAAGCGCC GGCTGCTCAT GGGTCTGTTG AACGATGCGC GGCCACTGCG TGTGATGGGC GCCACCTATT CGGCCCTGAC CCAAAGCGAA CTCGCTGTTT TCGAGACCGC CAAAGTCATG CGCTCGCTGT TTGGCGCCCA GGCGATTCGC CACTACATCA TCAGCCACAC CGAAACCGTG AGCGACCTGC TCGAAGTGCT GCTGCTGCAA AAAGAAGTCG GTTTGCTGGA GGGCACGCTC GACGAGCAGG CGCGCTGTGA CCTGATCGTG GTGCCGCTGT TTGAAACGAT TGAAGACTTG CGCCATGCGG CGTCCATCAT GCGCGAGTAT TACGCCCTGC CCGGCATCCA CGCGCTGGTC AGCCGGGGCC GGCCCGACCA GTACCACGAG CAGGACATCA TGCTGGGCTA CTCCGACAGC AACAAGGACG GCGGCATTTT CACCAGCAAC TGGGAGCTGT ACCAGGCCGA AATTGCGCTG GTCGACGTGT TTGACGAAAT GGCGGCCAGC CAAAATATTC CAAGCGATGC CGGGTCGGTG ACTGAGGTCC GGGCGATTCA GTTGCGCCTG TTCCATGGTC GCGGCGGCAC CGTGGGGCGC GGCGGCGGCC CCAGCTACCA GGCCATTCTG GCGCAGCCAC CCGGCACCGT GCGCGGTCAA ATCCGGCTGA CGGAGCAGGG TGAGGTGATC GGCTCCAAGT ACGCCAACCC CGAGATCGGC CGGCGCAACC TCGAAACCCT GGTGGCCGCC ACGCTGGAGG CCACCTTGCT CCAGCCCACC AAGTCGGCCA GCGCGCCGTT CCTGAAAGCT GCTGCCGAGC TGTCGCTCAG CAGCATGGCA GCCTACCGGC AACTGGTCTA TGAAACCCCA GGTTTCACCG ACTACTTTTT TGCTGCCACG CCAATCCGCG AGATTGCCGA GCTCAACCTG GGCTCACGGC CGGCCTCGCG CAAGCCGTCA CACAAAATTG AAGACCTGCG CGCCATTCCG TGGGGCTTTA GCTGGGGCCA GTGCCGTTTG ACGCTGCCCG GCTGGTACGG CTTTGGCTCA GCGGTTGAAT CGTTTCTGGC CCAGGACGGG CAGAAAGACC CCTTGGCACT GCTGCAAAAA ATGCACCGGC AATGGCCTTT TTTCAAGACC TTGCTCTCCA ACATGGACAT GGTGATGGCC AAAAGCGACC TGGCGCTGGG TTCTCGCTAC GCCGAGCTGG TGACGGACGC CCGCCTGCGC AAGAAAATCT TTGGCGCCAT TGAAGCCGAG TGGCACCGCA CCGCCGACGC CTTGAGCCTG ATCACCGGCG ACCCGCATCG CCTGGCCCAC AACACCGCCC TGCAACGCTC CATGCGCCAC CGCTTTCCCT ACATTGACCC CTTGCATCAC CTGCAAGTCG AACTGGTGCG CCGCTACCGT GCCGGACAGA CCGATGAACG CCTCAAGCGC GGCATTCATA TCTCGATCAA TGGCATTGCC GCAGGGCTCA GGAACACCGG TTAA
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Protein sequence | MIKPQKVAPT QRIQDNERPL VDDIRLLGRI LGDVIREQEG VAAYELIEEI RQLSVAFRRD ADHDADKALK KLLKGLSSDQ AVSVTRAFTY FSHLANLAED RHHIRRRAIH ERAGDTQEGS IEVAMARLHA AGITPESIAS SLASSYLSPV LTAHPTEVQR KSILDAERDI AQLLTARDEI KVNAAAHRSV NTKKDALTPR ELLLNEQQMK ARVLQLWQTR LLRSSKLTVA DEVENALSYY ETTFLSEIPR LYTELERELG PNPVHSFLRM GQWIGGDRDG NPHVNAQTLA HALRRQADVA LRHYLTEVHY LGGELSLSAM LVNCLAPMQA LAERSPDSNE HRKDEPYRRA LIGVYARLAA VLKDLTGGEA ARHAVAPQNA YANAEEFLAD LRIIEASLLA HHGEALVAQR LHPLIRAVEV FGFHLATVDL RQSSDQHEAV MAELLAVARL ESAYPQLDEM AKRRLLMGLL NDARPLRVMG ATYSALTQSE LAVFETAKVM RSLFGAQAIR HYIISHTETV SDLLEVLLLQ KEVGLLEGTL DEQARCDLIV VPLFETIEDL RHAASIMREY YALPGIHALV SRGRPDQYHE QDIMLGYSDS NKDGGIFTSN WELYQAEIAL VDVFDEMAAS QNIPSDAGSV TEVRAIQLRL FHGRGGTVGR GGGPSYQAIL AQPPGTVRGQ IRLTEQGEVI GSKYANPEIG RRNLETLVAA TLEATLLQPT KSASAPFLKA AAELSLSSMA AYRQLVYETP GFTDYFFAAT PIREIAELNL GSRPASRKPS HKIEDLRAIP WGFSWGQCRL TLPGWYGFGS AVESFLAQDG QKDPLALLQK MHRQWPFFKT LLSNMDMVMA KSDLALGSRY AELVTDARLR KKIFGAIEAE WHRTADALSL ITGDPHRLAH NTALQRSMRH RFPYIDPLHH LQVELVRRYR AGQTDERLKR GIHISINGIA AGLRNTG
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