Gene Rfer_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1668 
Symbol 
ID3960417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1799121 
End bp1799783 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637916492 
Producthypothetical protein 
Protein accessionYP_522929 
Protein GI89900458 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.994218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAG AATTTCCTCC TTACTCAAGC TCCCTGATGA AACAAGACAA ATCCGCAGCG 
CCACAGAAAC CGGCACAGCC CATCCGGCCC CGCAGCCCGC AGACACATGA GGTGCGCATC 
ATCGGTGGTC TCTGGAAACG CACCAAGCTC GCCGTGGTCG AACATCCGGG CCTGCGCCCG 
ACACCCGACC GCGTGCGCGA GACCCTGTTC AACTGGCTGG GCCAGGACCT GACCGGTTGG 
CGCTGTATCG ATGCCTTTGC CGGTACCGGT GCACTCGGCT TTGAGGCCGC GTCCCGTGGT 
GCCAAAGAAG TGTTGCTGGT GGAGCAGGAC ACCGCCCTGG TGGCCCAGCT CAAGCGCGTT 
CAGATCCAAC TGCAAGCCAG CACGACGCAG ATCGTGCGAG GTGATGGCCT GGCGGCCCTC 
AAACACCTGG ACCCAGCCAG CATGGACGCC GTGTTTCTGG ATCCACCCTT TGACTCCGTG 
CTGTTTGAGG CGGCGCTGCA AGCAGCAGGC CGCGCCGTGG CAGCAGGTGG TTTTGTGTAC 
TTGGAGGCCC CGATTCCATG GACAGACGCG CAGCTTGAGA GCGCCGGGCT GCAAGTGCAC 
CGGCACCTCA AAGCCGGTGC TGTTCACGCC CATCTGCTCA AGCGCATCGG GTCAGACGCT 
TGA
 
Protein sequence
MAQEFPPYSS SLMKQDKSAA PQKPAQPIRP RSPQTHEVRI IGGLWKRTKL AVVEHPGLRP 
TPDRVRETLF NWLGQDLTGW RCIDAFAGTG ALGFEAASRG AKEVLLVEQD TALVAQLKRV 
QIQLQASTTQ IVRGDGLAAL KHLDPASMDA VFLDPPFDSV LFEAALQAAG RAVAAGGFVY 
LEAPIPWTDA QLESAGLQVH RHLKAGAVHA HLLKRIGSDA