Gene Rfer_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1662 
Symbol 
ID3960411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1793597 
End bp1794274 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID637916486 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_522923 
Protein GI89900452 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.107221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCACT CGTGGGCCAT TTTGTTTTTT TGCGCTTACC CTGATAATTT GGACATGATC 
AAACTCTTTG TTGGTCTTGG CAACCCCGGC CCCGAATACG AATTCACCCG TCACAACGCG 
GGCTTTTGGT GGCTGGACGC GGTCGCCCGC GAGCTCAAAG CAAGTCTGGC GATGGACAAA 
ACTTACCATG GCCTGGTAAC GCGAGTCACC GTCAACGGGC AAGCGGTCTG GCTGCTCAAA 
CCGCAAACCT TCATGAACCT GAGCGGTAAA TCGGTCGCAG CACTGGCCCG TTTCTTCAAG 
ATTGAGCCAC AGGAAATACT GGTGGCACAC GACGAACTGG ATATCGTGCC CGGCGAGGCC 
AAGCTCAAGC TTGGAGGCAG CCATGCCGGC CACAACGGTT TGCGTGACAT TCACGCTCAA 
CTGGGTACCG ACGACTATTG GCGCCTGCGC TTGGGTGTCG GGCATCCGGG TGTCAAGTCG 
GAAGTCATCA ACTGGGTGTT GAAGAAACCA TCGCTGGATC ACCGACTGGC GATGGATCAG 
TGCATCGCCC GCGCCATCAC AGCCCTGCCG CACCTGTTGG CCGGTGACAT GGACAAAGCC 
ACGCTGCTGA TACACACCAG CAAGCCGCCC AGACCGAAGC CGCCCAGACC TGAAAATACA 
CTGCCTGCAG TGCCGTAA
 
Protein sequence
MAHSWAILFF CAYPDNLDMI KLFVGLGNPG PEYEFTRHNA GFWWLDAVAR ELKASLAMDK 
TYHGLVTRVT VNGQAVWLLK PQTFMNLSGK SVAALARFFK IEPQEILVAH DELDIVPGEA 
KLKLGGSHAG HNGLRDIHAQ LGTDDYWRLR LGVGHPGVKS EVINWVLKKP SLDHRLAMDQ 
CIARAITALP HLLAGDMDKA TLLIHTSKPP RPKPPRPENT LPAVP