| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1657 |
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| Symbol | |
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| ID | 3962776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1788424 |
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| End bp | 1790187 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916480 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_522918 |
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| Protein GI | 89900447 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATT ATCATCTTAT GATGCCTTTT CACCGTTTCC GTCGTTTCCC CGTGCTGCTT
GCCCTCGTTT GCGCGTTGAG CGCGAGTGCA CAAACACAGT CTGGAAAAGC GGCTGAGCCC
ACGACTTCAG CGCTCAGCAG CGAGCTTTTT TATCAATTGT TGTTGGGGGA GCTCAATGCC
CGCGGCGGCG AACCCGGCGC CGCTTACTCG CTGATCCTTG ATGCGGCGCG AAAAACGAAT
GATCCAAGAC TCTACCAACG TGCTGTTGAC ATCGCCTTGC AGGCCCGCTC GGGCGACTCG
GCGTTGCTGG CCGCGCGTGC CTGGAAACAA GCGCAGCCCG CCTCCCGTGA GGCCAATCGC
TACGTCCTGC AAATATTGAT TGGTCTGAAC CGTATTGGCG AGACACTGGA GCCGCTCAAG
AGCGAGGTTG CAACAAGCGA TGCCAAAGAG CGGGTCAGCA CCATCTTGGG TCTTGCACGC
TATTTTGCCC GCGCGGCCGA TAAGAAACTG GCCGCCAGCA CGGTTGAGCA GGCGCTGACC
AGTCACTTGA ACGCGCCAGG GACCGGCGCT GCTGCCTGGA GCGTTATCGG ACGCATGCGT
CTTGATGCCG ATGACGCCAG CGGCGCATTG AGCGCGGCGC GCAAGGCCCA GGCGCTGGAT
GCCAAATCAG AGCATCCCGT CTTGCTGGCC TTGGCCATGA TGGGTGCCAA AGTGCCGCAA
GCTGAAGCCC TTGTGACTAA ATATCTCGAA GGTAAACCGC GGCCCGAGGT GCGAATGGTG
TATGTGCGCG TCTTGCTGGA CGCGCAGCGC TATGCTGAGG CGACAACGCA GCTGCAACTC
GTGACTTCTG AAAAACCTGA CTATGCAGAG GCCTGGCTGA TACGAGGTGT ACTCGAATTA
CAGGAGGGCC ATCCCGCTGT GGCCGAACGC TCGCTGCAGC AATTTGTGGA TCGGACACTG
GCCCAGCGCG ACGACACACC GCGCCCGCAA GCGCTGCGTG GTTTGACTCA GGCTTATCTT
TCCCTGGCCC AAATTGCCGA GCAAAGGAAG GATTTTGTTC AAGCCGATGT GTGGCTACAA
CGCATTGACA GTCAAGAAGA CCGGCTCAAC GCCCAACTGC GCCGGGCCGC TCTCCTGGCG
CGGCAAGGCA AGCTGGAAGA CGCGCGCCAA CTGATTCGCA GCCAACCCGA GGTGTCTCCT
GCAGACGGTC GGCTAAAAAT AAGTGCCGAA GCACAACTGC TGCGTGACAG CAAGCAGTAC
CCGGCCGCCT ACGAACTTCT GGCCCAGGCT GTTTCGACCA ATCCTGGGGA TTTTGACCTC
ACTTATGACC TGGCCATGGT GGCCGAAAAA CTGGGCAAGC TCGATGAGAT GGAACAGCTG
CTGCGCAGCG TCATCGCGGG CAAACCCGAC GATCCCCATG CCTATAACGC ATTAGGCTAC
TCACTGGCAG ATCGAAGCAT TCGCTTGGCC GAGGCCAAAC AGCTCGTTTT GAAGGCGCTG
GACTATGCGC CAGGTGACCC CTTCATTAGC GACAGTCTGG GCTGGGTTGA ATTCCGCAGT
GGCAATCTGG CCGAGGCTCA ACGCATTCTG GAGACCGCAT TCAAAGCCCG CCCGGATGCA
GAAATTGCAG CTCATTTGGG TGAGGTCTTG TGGAACCTGG GTCAGCGCGA TCAGGCGCTG
AGCACCTGGA AGCAGGGCTT GGAAATCAAC GCCGAAAATG AAACCCTGCT TGAAACACTG
AAACGCCTGC GCGTGACCTT GTGA
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| Protein sequence | MDYYHLMMPF HRFRRFPVLL ALVCALSASA QTQSGKAAEP TTSALSSELF YQLLLGELNA
RGGEPGAAYS LILDAARKTN DPRLYQRAVD IALQARSGDS ALLAARAWKQ AQPASREANR
YVLQILIGLN RIGETLEPLK SEVATSDAKE RVSTILGLAR YFARAADKKL AASTVEQALT
SHLNAPGTGA AAWSVIGRMR LDADDASGAL SAARKAQALD AKSEHPVLLA LAMMGAKVPQ
AEALVTKYLE GKPRPEVRMV YVRVLLDAQR YAEATTQLQL VTSEKPDYAE AWLIRGVLEL
QEGHPAVAER SLQQFVDRTL AQRDDTPRPQ ALRGLTQAYL SLAQIAEQRK DFVQADVWLQ
RIDSQEDRLN AQLRRAALLA RQGKLEDARQ LIRSQPEVSP ADGRLKISAE AQLLRDSKQY
PAAYELLAQA VSTNPGDFDL TYDLAMVAEK LGKLDEMEQL LRSVIAGKPD DPHAYNALGY
SLADRSIRLA EAKQLVLKAL DYAPGDPFIS DSLGWVEFRS GNLAEAQRIL ETAFKARPDA
EIAAHLGEVL WNLGQRDQAL STWKQGLEIN AENETLLETL KRLRVTL
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