Gene Rfer_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1652 
Symbol 
ID3962771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1781959 
End bp1783635 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content63% 
IMG OID637916475 
ProductDNA repair protein RecN 
Protein accessionYP_522913 
Protein GI89900442 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTCA AACGTATTGT CTTGCGTGAT TTTGTGATTG TGCGCGAGCT CGACCTCGAT 
CTGGCTGACG GTTTCACCGT TCTCACCGGT GAAACCGGTG CCGGCAAGTC GATCCTGATT
GACGCGCTGC AGTTGGTCAC CGGCGGCCGG GCCGATGTCG GGGTGATCCG CGAGGGCTCA
AGTCGCACCG ATGTCAGCGC CGAGTTCGAC GCGACGGCTG ACCTGGCGCT TTGGCTTGAA
ACTGCGGGCT TTGAGCTCGG TGACAGCCTC TTGTTGCGAC GCACCGTGGA CGCCCAGGGC
AAAAGCCGCG CCTGGATCAA CGGCAGCCCG GCCACGGCCA CCCAGTTGCG GGCGGTGGGA
GAGCAACTGC TCGATATTCA TGGGCAGCAC GCCTGGCAAA GTTTGACCCG TCCGGAGGCT
GTACGGGGCT TGCTGGACGC TTACGCCCAG GTTTCATCTG CCGCCCTGGC AACTCTGTGG
CAACAGTGGC GTCAAGCGCA GAGCGATCTG GCGCAAGCCC ATGGCGCGCA AGAGTCGTTA
GAGCGTGAAC GCGAGCGACT GGCGTGGCAA ATTGGTGAAG TCGAAAAGCT GGCGCCGCAG
CCGCACGAGT GGCTTGAGCT CAACACAGAA CACGGCCGAC TGTCCCATGC GCAAGCCCTA
TTGGATGCTG CCCAAGGCGC CTTGCAGACG CTGGGTTCTG ACGATGACGG CGGCGCTCTG
GTGGCGCTGC ATGACGCCTG CCAGTTGCTT CAACAACAGG AGCACCTTGA GCCCTATTTT
AAAGGGCTGA CGGAGGTTTT GACCTCAAGT CTGGCGCAGG TGGAAGACAC GGTTCATTGC
CTGCGGGGCT ACCTGCGCAA GACCGAGCTT GACCCCCAGC GCCTGGGCGA ACTCGATGAG
CGCATGGCCT TGTGGCTGTC CTTGGCCAGA CGCTACCGCA GAGACCCGGC GGAGTTGCCT
GATTTGCTGC TGTCCTGGAA ACAGGAACTG CAAAAGCTCG ATGCTGCCGG CGATTTGGCC
GGGCTGGAAG CCGCATGCGC GGCGGCTCTG GGCGCCTATA TGCAGCAGGC CCGGCAGCTC
TCCAAGGCGC GCACCAAAGC CGCACCGCGG CTGGCAGCAG CCATCACCCA GGCCATGCAG
GGGCTGGGTA TGCAAGGGGG CCGGTTCGAA GTGGCACTGC AAGCCTCTGC TCAGCCGACG
CAAAGTGGCC TGGAAGAGGT CAGCTTTCTG GTGGCCGGGC ATGCGGGCAG TACGCCCCGG
CCGGTCAACA AAGTGGCTTC TGGCGGTGAG CTGTCCCGTA TGGCGCTGGC GATCGCGGTC
ACGACCAGCC GGCTTGGCAC CGCACAGACG CTTATTTTTG ACGAGGTGGA TGCCGGCGTG
GGTGGCGCTG TGGCCGAGAC CGTCGGTCGC CTCATGCAGC AATTGGGTGT TGACCGGCAG
GTGCTGGCGG TGACCCATCT GCCTCAGGTC GCTGCCTGTG CGGACCACCA TTGGGTGGTG
GCCAAACAAT TGCTGGGCAA GTCGACGGTG AGTTCAGTCC TTGCTGTGCA GGGCGAACAA
CGGGTGGCGG AAGTGGCGCG CATGTTGGGT GGCGAGCGCC TCTCAGGCAC GACACTGGCG
CACGCCAGGG AAATGCTGCA AACAGGGGAA TCATTCGATG AAGTCCGAGG CCGATAA
 
Protein sequence
MSLKRIVLRD FVIVRELDLD LADGFTVLTG ETGAGKSILI DALQLVTGGR ADVGVIREGS 
SRTDVSAEFD ATADLALWLE TAGFELGDSL LLRRTVDAQG KSRAWINGSP ATATQLRAVG
EQLLDIHGQH AWQSLTRPEA VRGLLDAYAQ VSSAALATLW QQWRQAQSDL AQAHGAQESL
ERERERLAWQ IGEVEKLAPQ PHEWLELNTE HGRLSHAQAL LDAAQGALQT LGSDDDGGAL
VALHDACQLL QQQEHLEPYF KGLTEVLTSS LAQVEDTVHC LRGYLRKTEL DPQRLGELDE
RMALWLSLAR RYRRDPAELP DLLLSWKQEL QKLDAAGDLA GLEAACAAAL GAYMQQARQL
SKARTKAAPR LAAAITQAMQ GLGMQGGRFE VALQASAQPT QSGLEEVSFL VAGHAGSTPR
PVNKVASGGE LSRMALAIAV TTSRLGTAQT LIFDEVDAGV GGAVAETVGR LMQQLGVDRQ
VLAVTHLPQV AACADHHWVV AKQLLGKSTV SSVLAVQGEQ RVAEVARMLG GERLSGTTLA
HAREMLQTGE SFDEVRGR