| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1647 |
|---|
| Symbol | |
|---|
| ID | 3962766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1777430 |
|---|
| End bp | 1778221 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637916470 |
|---|
| Product | CRP/FNR family transcriptional regulator |
|---|
| Protein accession | YP_522908 |
|---|
| Protein GI | 89900437 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.362036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATGCCG CGATCAACCG CAATCAAAAC CACCTGCTGG CTGCCTTGCC GGCGGTCGAG
TTCGGGCGCA TTGCGCCGGA ACTGGAGTTG GTTGCGATGT TGCAGGGCGA AGTTCTTTAT
GAATCCGGGC AAGCCCTGCA GTATGTCTAT TTCCCGACAA GCGCCATCGT GTCCCTGAAC
TGCGTGACCG AGAGCGGCGC AACGTCCGAT ATCGCTTGGG TGGGCTGTGA GGGCGTTATT
GGCACTGCGC TTGTCATGGG CTGCCATGCC ACCCCGACAG CGGCCGTCGT CTGTGTCGGC
GGCTATGGCT ACCGACTGAA GGAACAAATG CTGATGCAGG AACTCCGTCG CACCGGCGGG
CGCCGTGCCG GGGTGATGCA GCACTTGTTG CTGCGCTACA CCCAGGCGCT GATGACGCAG
CTATCCCAAA CGGCGGTCTG CAATCGGCAT CATTCGGTGG AGCAGCAACT GTGTCGCTGG
CTGCTGTCAA CGCTCGACCG TTTGCCCTCC AATGAATTGA CCATGACGCA CGAACATATC
GCCTGCATGC TCGGTGTGCG CCGTGAAGGC ATCACCGAAG CCGCCGGGCA TTTGCAGCAA
GCGGGTCTCA TTCGTTATTA CCGCGGCCAT ATCACCGTGC TTGACCGCGC GGGCTTGGAG
ACCCACGTGT GTGAATGCTA CGCGGTGGTC AAAAAGGAGC ATCAGCGTTT GCTGCACGAC
GTAGGCGAGC GAGCGGAACT TTTTCCCAGT CAGTCGCCGC AAATTTTTCA CCTGGCGTCA
GACTTTGCCT AG
|
|---|
| Protein sequence | MDAAINRNQN HLLAALPAVE FGRIAPELEL VAMLQGEVLY ESGQALQYVY FPTSAIVSLN
CVTESGATSD IAWVGCEGVI GTALVMGCHA TPTAAVVCVG GYGYRLKEQM LMQELRRTGG
RRAGVMQHLL LRYTQALMTQ LSQTAVCNRH HSVEQQLCRW LLSTLDRLPS NELTMTHEHI
ACMLGVRREG ITEAAGHLQQ AGLIRYYRGH ITVLDRAGLE THVCECYAVV KKEHQRLLHD
VGERAELFPS QSPQIFHLAS DFA
|
|---|
| |