| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1643 |
|---|
| Symbol | |
|---|
| ID | 3964172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1773305 |
|---|
| End bp | 1774288 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637916466 |
|---|
| Product | zinc-binding alcohol dehydrogenase |
|---|
| Protein accession | YP_522904 |
|---|
| Protein GI | 89900433 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.561484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGAG GAATTCTCAT CACCAAGGAT GATGCCGGTT ACAAGGCCGA GCTTCAGACC
ATCGACGAGG CCGTGCTGCC TGCTGGCGAT GTCACGGTCC AGGTCGAGTG GTCAACACTC
AACTACAAGG ACGCGCTGGC GATCACCGGA AAATCACCGG TGGTTCGACG CTTCCCCATG
GTCCCAGGCA TCGATTTCGC GGGTACCGTG CTTGAGAGCA CCAACGCAGC CTGGCAGGCT
GGCGACAAGG TCATACTGAA CGGCTGGGGT GTGGGCGAAA CCCACTGCGG GGGTCTGGCT
GAAATAGCGC GTGTCAAGGG CGAGTGGCTG CTTGCTCTGC CAAACAGCTT CACGACACGC
CAGGCCATGG CCATCGGCAC CGCCGGCTAT ACCGCCATGC TGTGCGTCCT GGCGCTGGAA
AAACATGGCA TCGAGCCTCC CGATGGTGAG ATTCTCGTCA CCGGCGCCAA CGGTGGTGTG
GGCAGCGTCG CCGTCGCCTT GCTTGCCAAG TTGGGCTACA CGGTCGTCGC GTCGACCGGG
CGCAGCGCCG AGGCCGATTA CCTCAAGGCG CTGGGCGCAA GCCAGGTCAT CGATCGCAGC
GAACTCTCAG CACCCGGCAA GCCCATCGGC AAGGAGCGCT GGGCCGGGGT GATTGACACC
GTCGGGAGCC ATACGCTGGC CAATGCCTGC GCCACCACGC AATACCGCGG TGCGGTGGCC
GCTTGCGGAC TTGCGGGCGG CATGGATTTC CCGGCCACGG TGGCGCCATT CATCCTGCGC
GGCGTGACCC TGTATGGCAT CGACAGCGTC ATGGCCCCGC TCAAGGTTCG TCAAGAAGCG
TGGCAGCGGC TCAGCCGCGA CCTCGACATC ACCAGGCTCG AAGCCATCAC CCGTGAAATA
GGACTTTCGC AGGCCATCGC CGTGGCAACA GAATTACTGG ACGGCAAAGT GCGCGGTCGT
GTTGTGGTTG ATGTGAAACG TTAA
|
|---|
| Protein sequence | MFRGILITKD DAGYKAELQT IDEAVLPAGD VTVQVEWSTL NYKDALAITG KSPVVRRFPM
VPGIDFAGTV LESTNAAWQA GDKVILNGWG VGETHCGGLA EIARVKGEWL LALPNSFTTR
QAMAIGTAGY TAMLCVLALE KHGIEPPDGE ILVTGANGGV GSVAVALLAK LGYTVVASTG
RSAEADYLKA LGASQVIDRS ELSAPGKPIG KERWAGVIDT VGSHTLANAC ATTQYRGAVA
ACGLAGGMDF PATVAPFILR GVTLYGIDSV MAPLKVRQEA WQRLSRDLDI TRLEAITREI
GLSQAIAVAT ELLDGKVRGR VVVDVKR
|
|---|
| |