| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1638 |
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| Symbol | |
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| ID | 3964167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1769068 |
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| End bp | 1769877 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916461 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_522899 |
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| Protein GI | 89900428 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAA CATGGAGACT GTTTATGGAT ATGGGATTAG CAGGCAAGAC TGCACTGGTG
CTTGGCGCAG GTGGCGGATT GGGGTGCGCC ATTGCCAGTT CATTGGCACG CGAAGGGGCC
AACATTGCGG TCGCCGATAT CAATGAAGAG GCGCTCATGC GCACCGTTGA ATCGGTGCAA
AAAGCGGGCG GCACCGCACT GCCCCTGCTG TGGGATATTG GCGACCTGTC GGTGGTGGAT
GCGCGCATGC TGGAAATTGA AAGCCGATTT GGCAGCGTGG ATGTACTGAT CAACAATACG
GGCGGCCCAC CGCCCACCAC GGCGTTTGGC CAAGACGCGG CCCTGTGGAC GCGCAGTTTT
CAGAGCATGG TGTTGTCGGT GCTGGCCATC ACGGATCGTG TGCTGCCGGG CATGCGCGCC
AAGAAGTGGG GACGGATCAT CACCAGCACC TCTTCCGGCG TGGTGACCCC CATCCCGAAT
CTGGCAATCT CCAATGCGCT GCGTTTGTCC CTGGTCGGCT GGTCCAAGAC ACTGGCACGG
GAGGTGGCGC AGGACGGCAT TACGTGCAAC ATTATCTTGC CCGGCAGAAT TGCCACCGAG
CGCATCAAGT TTCTCGATGA AGCGAAAGCG AAAAGAGAAG GACGCGCCGT GTCGCAAGTC
TGTGCAGAAA GCACCAGCGC CATCCCCATG GGCCGCTACG GCAACCCGGA AGAATATGCC
GATGTCGTTA CCTTCCTGGC CAGCACGCGG TCGTCTTATA TGACGGGATC TACGTTGCGC
GTGGATGGCG GATTGATTTC CAGCATCTGA
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| Protein sequence | MQSTWRLFMD MGLAGKTALV LGAGGGLGCA IASSLAREGA NIAVADINEE ALMRTVESVQ
KAGGTALPLL WDIGDLSVVD ARMLEIESRF GSVDVLINNT GGPPPTTAFG QDAALWTRSF
QSMVLSVLAI TDRVLPGMRA KKWGRIITST SSGVVTPIPN LAISNALRLS LVGWSKTLAR
EVAQDGITCN IILPGRIATE RIKFLDEAKA KREGRAVSQV CAESTSAIPM GRYGNPEEYA
DVVTFLASTR SSYMTGSTLR VDGGLISSI
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