| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1637 |
|---|
| Symbol | |
|---|
| ID | 3964166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1768323 |
|---|
| End bp | 1769042 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637916460 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522898 |
|---|
| Protein GI | 89900427 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG AAACACTCCC CCTGGACGCG GACCTCATCC GCACGCTGTC CAATGTCACA
ACGGCCACCC TGACGACGGT GCTCTTGAAA AAGGGGCTTC GTCATGTCTG GCTCAAAGGC
ACCATGCCGA TCAAAAGCGA TCAGCCGCGT CGCGTTGGAC GGGCCTTCAC CTTGCGCTTC
GTCCCGGCAC GCGAAGATCT GGCCACGCCG GAATCCTGGT CTTCACCTAT CTCGACACGG
GCGGCCATCG AAGCCATGCC CGCAGGCTGT ATTGCCGTGG TCGATGCCAT GGGCGTGACG
GATGCCGGCA TTTTCGGTGA CATCCTGTGT ACACGGATGA GCAAACGCGG CGTTGCAGGT
CTTGTCACCG ACGGCGTGGT GCGCGACTTG GCGGGTGTGC TCGCCAGCGG ATTTCCGGTC
TGGTGCGCCG GCACGGCGGC GCCGCCGTCG GTTGCTGCCC TGACGTTCGT GAGTTGGCAG
GAACCAATTG CCTGCGGTGG CGTCGCCGTT TTTCCCAACG ATGTCATCGT CGTTGATTCA
GATGGCGCGG TGCTCATTCC GGCGGCGCTG CTGGAAGAGG TTGTGGCCTT GGCTGTCGAG
CAAGAACGCC TGGAAGCTTG GATCATGAAC GAGGTCGAAA AGGGTGCCGC CTTGCCGGGA
CTTTACCCAC CGAACGCCGC TACCAAAGTC CGCTATGAAG CGTCAAAAGA GAAAGCATGA
|
|---|
| Protein sequence | MTTETLPLDA DLIRTLSNVT TATLTTVLLK KGLRHVWLKG TMPIKSDQPR RVGRAFTLRF
VPAREDLATP ESWSSPISTR AAIEAMPAGC IAVVDAMGVT DAGIFGDILC TRMSKRGVAG
LVTDGVVRDL AGVLASGFPV WCAGTAAPPS VAALTFVSWQ EPIACGGVAV FPNDVIVVDS
DGAVLIPAAL LEEVVALAVE QERLEAWIMN EVEKGAALPG LYPPNAATKV RYEASKEKA
|
|---|
| |