| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1626 |
|---|
| Symbol | |
|---|
| ID | 3964155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1757338 |
|---|
| End bp | 1758255 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637916449 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522887 |
|---|
| Protein GI | 89900416 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.117242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTT ACAGCATGAC TGGTTATGCC AGTGCCCAGC ACAGCAGCGA CCGCCCCAGT
TCCGAGGCCG AGTCCAAAAG CGCGCCGCCC AATCATCTCG GACTGGAAAT CCGTTCCGTC
AACAGCCGTT TTCTGGACCT GTCGTTCAAG TTGCCCGAAG AGCTCCGGCA GTATGAACCG
GTGCTACGCG AACTGCTTGT CAGCCGGCTC AAGCGCGGCA AGGTCGAAGT ACGCGCCGCC
ATTGAAAGCA ACGTCCAGAG TAGCGTGGTG GATCCCACGC CACGGCTGCT GCAGCGTCTC
AACGCGGTGC AAGATAACGT CAAAGCCTGG CTACCGGACG CCGCACCCTT GAGCGTGGCG
GACGTCATCC GATTGGCCGC CGGCGAGCTC GGTGCCAACT GTGACTGGAG CGAAACCATT
CTGACACTGG CCCGCCAGGC GCTGGAAGAA ATGCTCAGTG CCCGCCAGCG CGAGGGCGCG
CGACTCGCCA CCATGTTGCT CGATCGCCTT GGCCAGATCC GCGCGCTGGC AGCACTTGCC
GTGCCACTGG TGCCGCAATT GGTGGCGCAG CAGCGCCAAC GCTTTCTGGA TCGCTGGCAG
GAGGCCATGG CCCTGACCGA CGGCAGCACG CTACCGGAAG CTGCGCGGGA CCGGGCCCTG
ACCGAAGCCA CCGCTTTTGC CATCCGCATT GACGTGGCCG AAGAAGTCAC CCGCATCCAG
TCGCACCTTG ATGAAATTGA ACGCCTGATC AAAAAAGGTG GCGAACTGGG CAAACGACTC
GACTTCCTGA TTCAGGAGTT GCACCGCGAA GCCAACACGC TGGGCTCCAA ATCGGCCGCG
CTGGAGTTGA CCCATATTTC GGTGGACATG AAAGTGTTGA TCGAGCAAAT GCGTGAGCAG
GTGCAAAACA TAGAGTAA
|
|---|
| Protein sequence | MSVYSMTGYA SAQHSSDRPS SEAESKSAPP NHLGLEIRSV NSRFLDLSFK LPEELRQYEP
VLRELLVSRL KRGKVEVRAA IESNVQSSVV DPTPRLLQRL NAVQDNVKAW LPDAAPLSVA
DVIRLAAGEL GANCDWSETI LTLARQALEE MLSARQREGA RLATMLLDRL GQIRALAALA
VPLVPQLVAQ QRQRFLDRWQ EAMALTDGST LPEAARDRAL TEATAFAIRI DVAEEVTRIQ
SHLDEIERLI KKGGELGKRL DFLIQELHRE ANTLGSKSAA LELTHISVDM KVLIEQMREQ
VQNIE
|
|---|
| |