| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1613 |
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| Symbol | |
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| ID | 3960477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1744260 |
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| End bp | 1746557 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916437 |
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| Product | selenide, water dikinase |
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| Protein accession | YP_522875 |
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| Protein GI | 89900404 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0709] Selenophosphate synthase
[COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | [TIGR00476] selenium donor protein
[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAC CTGAACAACC CATCCTCAGA GACATCGTGC TGGTCGGCGG TGGCCACAGC
CACGTGGGCG TGCTTAAAAG CTTTGGCATG CAGCCGGTTC CCGGCGTGCG CCTGACGGTC
ATCTGCACCG ACATGCATAC GCCCTACTCG GGCATGCTGC CCGGCTATGT GGCGGGCCAC
TATGACTATG ACGAAGTTCA CATTGACCTG AGCCGTCTGG CGGTATTCGC CGGCGCGCGC
CTGTACCGCG ACGAGGTGAT CGGGCTGGAC CGCGTCAACC GCAAGGTGCT GTGCCGCAAC
CGCCCGCCGG TGCCGTATGA CGTTCTGTCC ATCAACATCG GCTCCACGCC CCAGCTCCAC
GGCGTGCCGG GCGCTCTTGA GAACGCCATT GCGGTCAAAC CCATCACCCG CTTCAACGAG
CGCTGGCTGG CACTGCTGGA ACGTGTGCAG CGCCACCCCG GCACCACCAC CGTGGCCGTG
GTGGGGGCCG GTGCCGGCGG CGTGGAACTG CTGCTGGCCA TGCAGTGGCG CTTGCGCCAT
GCCTTGCGCG CGCTGGGTCG CAACCCCGAT GAGCTGGTCT TTCATCTGTT CAGCAGCGAC
GCCAACATTT TGCCGACCCA CAACCTGGGC GTGCGCAGGC GTTTTGACGC CGTGCTGGCC
GAGCGTCAGG TGCGGGTGCA CCGCAATGCA GCCGTCACGC AGGTGACGCC GGGGCGGCTG
CAAACCGCGG CAGGCGAGGT GATCGATACC GACGAGATCG TCTGGGTGAC CCGCGCCGGT
GGCGCTGCCT GGCTGCGAGA CACCGGCCTG GCGCTGGACG CAGATGGTTT CATTCAAGTC
ACCGACACCT TGCAGACGGT GACCGACCCC GCCGTTTTTG CCGCCGGCGA CATTGCCAGC
ATGGTGAACC ACCCGCTGGA GAAAGCCGGC GTTTTTGCGG TGCGCCAGGG GCCACCGCTG
GCAGCGAACC TGCGCTTGAG CGTGCAGGGC GGCACGTTGA AACCTTACCA CCCGCAACGC
AGTTGGTTGG CGCTCATCAG CACCGGCGAC CGGTACGCGG TGGCGTCACG CGGCTGGCTC
GGTTTTGCCG GGGCCTGGGT TTGGCGCTGG AAGGACTGGA TTGACCGGCG CTTCATGGCC
AAGTTCCAGG ACCTGACACC CATGGACACT CATGGCACCC GCGCGCAGCC GACATCGGCT
GGTGTAGCTG GGACAGTGCA GCTCACGCCC GAAGAATCGC TGCAAGCCAT CTCGGCCATT
GCCATGCGCT GCGGCGGCTG CGGCGCCAAG GTGGGCGCCA CGGTGTTGTC CCGCGCCTTG
AGCCAATTGC ACCCGGTGCA GCGCGAAGAC GTGATCATCG GCCTGAGCGA CCCGGACGAT
GCCGCCGTGG TGCGGGTGCC AGCCGGCAAA GCGATGGTGC ATTCGGTGGA CTTCTTTCGC
TCCTTCATTG ACGACCCCTA CCTCTTTGGC AAGGTCGCCG CCAACCATGC ACTGGGCGAC
ATTTGGGCCA TGGGCGCGCA GGCGCAATCG GCCACTGCGA TTGCCACCGT GCCCTCGGGC
CTGGAGAGCA AGGTCGAAGA CGTGTTGTTC CAGATGATGA CGGGCGCGCT GGAAGTGTTG
AACGAGGCCA ACTGCGCCCT GGTGGGTGGC CACACCGGCG AAGGCAAGGA GCTGGCGTTG
GGCTTTGCCA TCAATGGCTT GATCGATGAC GACCCGGCGC AGATCTTGCG CAAGAACGGC
ATGTGCCCCG GCGATGTGCT GATTCTCACC AAACCGATTG GCACCGGCAC CTTGTTTGCA
GCACACGCGC GCCTGAGCGC CAAGGGCCGC TGGATTGACG CGGCCCTGCA GTCCATGGTG
GTATCCAACC AAAAGGGCGC CCAGTGCCTG CGCGAATTTG GCGCGACTGC CTGCACCGAC
CTGACCGGCT TTGGACTGTT GGGCCACCTG GTAGAGATGA CACGCCCCTC GGGGGTGGAT
GCGGAACTTG ATTTAGGGGC CTTGCCCTTG CTCGACGGCG CACAGGAATG CGTGGCGGCG
GGCATCGTCA GCTCCTTGCA GAGCGCCAAT GTGCGCCTGC GCCGCGCCCT GCGCAACCAG
GAAGCGATGG TCAATCACCC CCGCTACCCG CTGATTTTTG ACCCGCAAAC GGCCGGTGGC
CTGCTGGCCA GCGTGCCAGC CGACAAGGCA CAGGCCTGCA TTGCGGCGCT GCGTGAACTG
GGCTACAGCC ACACGGTGGC GATTGGCCGG GTTTTGCCGC AAGGGGAAGC GCTGGAGCCG
ATTTCGCTCT GCGCGTGA
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| Protein sequence | MQAPEQPILR DIVLVGGGHS HVGVLKSFGM QPVPGVRLTV ICTDMHTPYS GMLPGYVAGH
YDYDEVHIDL SRLAVFAGAR LYRDEVIGLD RVNRKVLCRN RPPVPYDVLS INIGSTPQLH
GVPGALENAI AVKPITRFNE RWLALLERVQ RHPGTTTVAV VGAGAGGVEL LLAMQWRLRH
ALRALGRNPD ELVFHLFSSD ANILPTHNLG VRRRFDAVLA ERQVRVHRNA AVTQVTPGRL
QTAAGEVIDT DEIVWVTRAG GAAWLRDTGL ALDADGFIQV TDTLQTVTDP AVFAAGDIAS
MVNHPLEKAG VFAVRQGPPL AANLRLSVQG GTLKPYHPQR SWLALISTGD RYAVASRGWL
GFAGAWVWRW KDWIDRRFMA KFQDLTPMDT HGTRAQPTSA GVAGTVQLTP EESLQAISAI
AMRCGGCGAK VGATVLSRAL SQLHPVQRED VIIGLSDPDD AAVVRVPAGK AMVHSVDFFR
SFIDDPYLFG KVAANHALGD IWAMGAQAQS ATAIATVPSG LESKVEDVLF QMMTGALEVL
NEANCALVGG HTGEGKELAL GFAINGLIDD DPAQILRKNG MCPGDVLILT KPIGTGTLFA
AHARLSAKGR WIDAALQSMV VSNQKGAQCL REFGATACTD LTGFGLLGHL VEMTRPSGVD
AELDLGALPL LDGAQECVAA GIVSSLQSAN VRLRRALRNQ EAMVNHPRYP LIFDPQTAGG
LLASVPADKA QACIAALREL GYSHTVAIGR VLPQGEALEP ISLCA
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