| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1603 |
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| Symbol | |
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| ID | 3960655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1736610 |
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| End bp | 1737236 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637916428 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_522866 |
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| Protein GI | 89900395 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGCTT TGACAAACGA AGGCATGAAA TCAGATGCGT CCGAAGCATC GATCTTGTCT
GACACGGCAT TTTTGAATGA CTTGCGCCGT CAGATGGTGA AGTTTGCGAC GCTGCAGCTC
TCCAATAGCC ACGCTGCAGA GGATGCGGTG CAGGAGGCAC TCATCGGAGC GTTGAAAAAT
GCCCAGTCTT TCGCCGGGCG AGCCGCATTG AAAACCTGGG TATTTGCCAT TTTGCGTAAC
AAGATTGCCG ATGTCTTGCG GCAGAAAAAA CGCATGGTCG AGGCCAGCAG TTTGCTCCGG
GAAGACGAAG AGGGTGAGGA CTTCTCTGAA TTGTTTGATA AAAAAGGCTT TTGGCAATCC
GATGAAAAGC CAGCCTCATG GGGCAATCCG CAAGATTCCT TGCATCAGAA CCAGTTCTGG
AAAGTGTTCG AGATTTGTTT GGAGGGCTTG CCCGGCAACC AGGCCAGGGT GTTCATGATG
AAAGAATTCG TCGAATTGGA GGCCAATGAA ATTTGCACTG CCGTCGGAAT CACCACCACC
AACCTGAATG TGATGCTGCA CCGCTCCCGC CTGCGTCTGC GCGAGTGTCT TGAAAACAAT
TGGTTTCTGA AGGGAGAACA CGCATGA
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| Protein sequence | MDALTNEGMK SDASEASILS DTAFLNDLRR QMVKFATLQL SNSHAAEDAV QEALIGALKN
AQSFAGRAAL KTWVFAILRN KIADVLRQKK RMVEASSLLR EDEEGEDFSE LFDKKGFWQS
DEKPASWGNP QDSLHQNQFW KVFEICLEGL PGNQARVFMM KEFVELEANE ICTAVGITTT
NLNVMLHRSR LRLRECLENN WFLKGEHA
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