Gene Rfer_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1588 
Symbol 
ID3960639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1719347 
End bp1720012 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content56% 
IMG OID637916412 
Productcytochrome c, class I 
Protein accessionYP_522851 
Protein GI89900380 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.166336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TCCTGTCGCC AATGTCTGTC TTGTTGCTCG CTTGTATCAC GGCTACTTCT 
TCTTACGCAC AGGAAATCAA GGGAGATGAT AAAGCGGGCG AGAAAAAAAT CGCCATGTGC 
GTCGGCTGCC ACGGCATTAA GGGTTACCAA TCGAGTTTTC CAGAGGTCTA CAAGGTTCCC 
ATGATTTCGG GCCAGGGCGC CAAGTACATT GCGTCGGCTC TCAGTGCCTA CAAAAAGGGC 
GATCGCAAGC ATCCCACCAT GCGCGGCATT GCCGCTGGCC TGAGTGATCA GGACATCGCC 
GATGTCGCGG CCTATTATGA AGCGCAGAAC AAGATGCCAG CGGCGCCGAC CCCGGGCCCA 
GCCGCCGCAG GCTCGGCCCC AGTCGCAGCG CTGCTGCAAA AAGGCAACTG CGTGTCTTGC 
CATGGCGTCA ATTTCAGCCA ACCGATTGAC CCCACCTATC CCAAGATTGC CGGCCAGCAC 
GGCGATTATC TGTTTGTGGC GCTCAAATCC TACAAGACCG AAGGCAAGGC GCTATGGGGT 
CGTGGCAACC CCATCATGGG TGGCGTAGCC AAGCAATTCT CCAATGCGGA ACTGAAAGAA 
CTCGCCAACT ACGTCAGCTC GCTGCCGGGT GTGCTCCAAA CCCTGCCGCA GGCCAAGTTC 
AAGTAA
 
Protein sequence
MNKFLSPMSV LLLACITATS SYAQEIKGDD KAGEKKIAMC VGCHGIKGYQ SSFPEVYKVP 
MISGQGAKYI ASALSAYKKG DRKHPTMRGI AAGLSDQDIA DVAAYYEAQN KMPAAPTPGP 
AAAGSAPVAA LLQKGNCVSC HGVNFSQPID PTYPKIAGQH GDYLFVALKS YKTEGKALWG 
RGNPIMGGVA KQFSNAELKE LANYVSSLPG VLQTLPQAKF K