Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1588 |
Symbol | |
ID | 3960639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1719347 |
End bp | 1720012 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637916412 |
Product | cytochrome c, class I |
Protein accession | YP_522851 |
Protein GI | 89900380 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.166336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TCCTGTCGCC AATGTCTGTC TTGTTGCTCG CTTGTATCAC GGCTACTTCT TCTTACGCAC AGGAAATCAA GGGAGATGAT AAAGCGGGCG AGAAAAAAAT CGCCATGTGC GTCGGCTGCC ACGGCATTAA GGGTTACCAA TCGAGTTTTC CAGAGGTCTA CAAGGTTCCC ATGATTTCGG GCCAGGGCGC CAAGTACATT GCGTCGGCTC TCAGTGCCTA CAAAAAGGGC GATCGCAAGC ATCCCACCAT GCGCGGCATT GCCGCTGGCC TGAGTGATCA GGACATCGCC GATGTCGCGG CCTATTATGA AGCGCAGAAC AAGATGCCAG CGGCGCCGAC CCCGGGCCCA GCCGCCGCAG GCTCGGCCCC AGTCGCAGCG CTGCTGCAAA AAGGCAACTG CGTGTCTTGC CATGGCGTCA ATTTCAGCCA ACCGATTGAC CCCACCTATC CCAAGATTGC CGGCCAGCAC GGCGATTATC TGTTTGTGGC GCTCAAATCC TACAAGACCG AAGGCAAGGC GCTATGGGGT CGTGGCAACC CCATCATGGG TGGCGTAGCC AAGCAATTCT CCAATGCGGA ACTGAAAGAA CTCGCCAACT ACGTCAGCTC GCTGCCGGGT GTGCTCCAAA CCCTGCCGCA GGCCAAGTTC AAGTAA
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Protein sequence | MNKFLSPMSV LLLACITATS SYAQEIKGDD KAGEKKIAMC VGCHGIKGYQ SSFPEVYKVP MISGQGAKYI ASALSAYKKG DRKHPTMRGI AAGLSDQDIA DVAAYYEAQN KMPAAPTPGP AAAGSAPVAA LLQKGNCVSC HGVNFSQPID PTYPKIAGQH GDYLFVALKS YKTEGKALWG RGNPIMGGVA KQFSNAELKE LANYVSSLPG VLQTLPQAKF K
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