Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1581 |
Symbol | |
ID | 3960918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1711934 |
End bp | 1712170 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637916405 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_522844 |
Protein GI | 89900373 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0488508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATA TGCCTATTGA AGAATGTGTG CGCAGCAACC TGGAGGGTTA TCTGCGCGAT CTCGGTGGCA CCGAACCCGA CGGCATGTAC AACATGCTGG TCAATGTGGT GGAGCGACCG CTGCTTGAAG TGGTGATGCG CCATGCGGAT CACAACCAGT CCAAAGCGGC CCAATGGCTG GGCCTGAACC GCAACACGCT ACGTAAAAAA CTGCTCGATC ACAAGCTGAT CAAGTAA
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Protein sequence | MSHMPIEECV RSNLEGYLRD LGGTEPDGMY NMLVNVVERP LLEVVMRHAD HNQSKAAQWL GLNRNTLRKK LLDHKLIK
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