Gene Rfer_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1581 
Symbol 
ID3960918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1711934 
End bp1712170 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content54% 
IMG OID637916405 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_522844 
Protein GI89900373 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0488508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATA TGCCTATTGA AGAATGTGTG CGCAGCAACC TGGAGGGTTA TCTGCGCGAT 
CTCGGTGGCA CCGAACCCGA CGGCATGTAC AACATGCTGG TCAATGTGGT GGAGCGACCG
CTGCTTGAAG TGGTGATGCG CCATGCGGAT CACAACCAGT CCAAAGCGGC CCAATGGCTG
GGCCTGAACC GCAACACGCT ACGTAAAAAA CTGCTCGATC ACAAGCTGAT CAAGTAA
 
Protein sequence
MSHMPIEECV RSNLEGYLRD LGGTEPDGMY NMLVNVVERP LLEVVMRHAD HNQSKAAQWL 
GLNRNTLRKK LLDHKLIK