Gene Rfer_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1573 
Symbol 
ID3960910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1702071 
End bp1702850 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637916397 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_522836 
Protein GI89900365 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0661339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG AACTGATCAC GATTCGCACC GAAGCCGACA AAATTGGCAT CCTGACCCTG 
AATCGACCGA AGCAACTCAA CGCGCTGAAC GACCAGTTGA TGACCGAGTT GGGTGCGGCG
CTCAAAGCTT TTGACAGCGA CCCGGCGATT GCCTGCATGA TCATCACAGG GAGCGAAAAA
GCCTTTGCCG CCGGGGCCGA CATCGGCGCC ATGGCCCAAC TCAGTTTTGC CGACGCCTAC
AAAAGCGACT TCATCACGCG CAACTGGGAG CAAATTCGCA GTGTTCGCAA ACCGGTCATT
GCGGCGGTCA GCGGTTTTGC GCTGGGCGGT GGCTGCGAGC TTGCCATGAT GTGCGACTTC
ATCATCGCGG CTGACAATGC CCGGTTTGGC CAACCCGAAA TCAAGCTTGG CATCATTCCC
GGCGCCGGCG GCACGCAACG GCTGCCACGC GCGCTCGGCA AGGCCAAGGC GATGGACCTG
ATACTCACCG GCCGCATGAT GGACGCTCTG GAGGCCGAGC GCGCGGGCCT GGTCAGCCGC
GTGGTGCCGC TGGACAAACT GATGGAAGAA GCGTTGGGCG CAGCCCTGAT GATCGCCGAG
TACTCGCAGA TTGCCACCAT GGCCGCCAAG GAATCCGTCA ACCGGGCATT TGAGGGCACG
CTGAGTGATG GCATCATTTT CGAGCGCCGC CTGTTCCACG CGCTGTTTGC CACCGCCGAT
CAAAAAGAAG GCATGGACGC TTTTGTGAAC AAACGCAAGG CGAATTTCCA GCACCAATAA
 
Protein sequence
MNYELITIRT EADKIGILTL NRPKQLNALN DQLMTELGAA LKAFDSDPAI ACMIITGSEK 
AFAAGADIGA MAQLSFADAY KSDFITRNWE QIRSVRKPVI AAVSGFALGG GCELAMMCDF
IIAADNARFG QPEIKLGIIP GAGGTQRLPR ALGKAKAMDL ILTGRMMDAL EAERAGLVSR
VVPLDKLMEE ALGAALMIAE YSQIATMAAK ESVNRAFEGT LSDGIIFERR LFHALFATAD
QKEGMDAFVN KRKANFQHQ