| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1571 |
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| Symbol | |
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| ID | 3960907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1698030 |
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| End bp | 1700672 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916394 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_522834 |
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| Protein GI | 89900363 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.612234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAT TCGCCAAAGA AACCCTGCCC GTCAGCCTTG AAGAGGAAAT GCGGCGCAGT
TACCTCGATT ACGCCATGAG CGTGATTGTG GGCCGTGCCC TGCCCGATGC GCGGGACGGT
TTGAAACCAG TGCATCGCCG TGTGCTGTTT GCGATGCACG AACTCAATAA CGACTGGAAC
CGGCCGTATA AGAAATCGGC ACGTATCGTC GGCGACGTGA TTGGCAAGTA CCACCCGCAC
GGTGACCAGT CTGTCTACGA CACCATCGTG CGGATGGCGC AGGATTTTTC CATGCGCCAC
ATGCTGGTCG ACGGGCAAGG CAACTTTGGC TCGGTCGACG GCGACAACGC AGCGGCCATG
CGTTACACCG AAATCCGCCT GTCCAAGATC GCCCACGAGC TGCTGGCTGA TCTGGACAAG
GAGACCGTTG ATTTCGGCCC CAATTACGAC GGTTCCGAAA AAGAACCGCT GGTGCTGCCA
ACCCGCCTGC CCAACCTGCT GGTCAACGGC TCCGGTGGCA TTGCCGTGGG TATGGCCACC
AACATCCCGC CGCACAACCT GAATGAAGTG GTGGATGCCT GCCTGCACCT GCTGCGCAAC
CCGGAGGCCT CGATTGACGA ACTGATGGAG ATCATTCCGG CGCCCGATTT CCCCACCGCC
GGCATCATTT ACGGCATCCA GGGTGTCAAG GACGGCTATC GCACCGGTCG GGGTCGGGTG
GTGATGCGCG CCAAGGTGCA TTTCGAAGAC ATCGACAAAG GCCAGCGCCA GTCCATCATC
GTCGACGAGC TGCCCTACCA GGTCAACAAA AAGACACTGC AAGAGCGCAT GGCCGAACTG
GTGCACGAGA AGAAAATCGA GGGCATCAGC CACATCCAGG ACGAATCCGA CAAATCCGGC
ATGCGGCTGG TGATTGAACT CAAGCGCGGC GAGGTGCCCG AGGTGGTGCT CAACAACCTG
TACAAGCAAA CGCAGCTGCA GGACACCTTT GGCATGAACA TGGTGGCGCT GATCGACGGC
CAGCCCAAGC TGTGCAACCT CAAAGACCTG ATTAAAGTGT TTTTGCAGCA CCGCCGCGAG
GTGGTGACCC GTCGCACAGT GTTCAATCTG CGCAAGGCGC GCGAGCGCGG CCACGTGCTC
GAAGGCCTGG CCGTTGCGCT GGCCAATATC GACGAATTCA TCGCCATCAT CCGCAACGCC
CCCACACCAC CGGTGGCCAA GGTCGAACTG ATGGCCAAGC CCTGGGACAG TAAATTGGTG
CGCGAAATGC TGACCCGCAC CCGCGCCGAC GGCGGCGTGA TCAACGCCGA CGACTACCGC
CCCGACGGCC TGGAGAAGAT GTACGGCATG GGCAGCGATG GCCTGTACCG CCTGTCCGAC
ACGCAGGCGC AGGAAATTCT GCAGATGCGT TTGCAGCGCC TGACCGGCCT GGAGCAGGAC
AAAATCGTCG CCGAATACAA AGAGGTGATG GGCGAGATCG AAGACTTGCT CGACATTCTT
GCCAAGTCCG AACGGGTCTC CACCATCATT TACGAAGAAC TCACCGCCAT CAAGACCGAG
TTTGGCCAAA CCAAACTGGG CGCGCGGCGC AGCCTGGTGG AGCACAGCTC GTTTGACTTG
AGCACGGAAG ACCTGATCAC GCCCACCGAC ATGGTGGTGA CGCTCTCGCA CAGCGGCTAC
ATCAAGAGCC AGCCGCTGAG TGAATACCGG GCGCAAAAGC GCGGCGGGCG CGGCAAGCAA
GCCACCGCCA CCAAAGAAGA CGACTGGGTC GACCAGCTCT TCATTGCCAA CACGCACGAT
TACATCCTGT GTTTCAGCAA CCGGGGTCGT CTCTACTGGC TCAAGGTTTG GGAAGTGCCC
CAGGGCTCGC GCGGTTCACG CGGGCGCCCG ATCGTCAACA TGTTTCCGCT GCAAGAGGGT
GAAAAGATCA ATGTGGTGCT GGCACTGACC GGCGAGAAGC GCAGCTTCCC CGCTGACCAG
TACGTGTTCA TGGCCACCTC CATGGGCACC GTCAAGAAAA CACCGCTGGA CGAATTCAGC
AACCCGCGCA AGGGCGGCAT CATCGCCGTC GGCCTGGATG AGGGCGACTA CCTGATCGGC
GCCGCGCTGA CCGACGGCAA GCACGACGTG ATGTTGTTCA GCGATGGTGG CAAGGCGGTG
CGCTTTGACG AGAACGATGT GCGCCCGATG GGCCGCAATG CCCGAGGCGT GCGCGGCATG
ATGCTGGAAG ACGGCCAGGG CGTGATCGCC ATGCTGGTGG CCGAGGATGA GTTGCAAAGC
GTGCTGACCG CGACCGTCAA CGGCTATGGC AAGCGCACCA GCATCACCGA GTACACCCGC
CATGGCCGCG GTACCAAGGG CATGATTGCC ATCACCCAGT CCGAACGCAA TGGCAAAGTG
GTGGCCGCCA CCCTGGTGCA TGCCGACGAC GAAATCATGC TGATCACCGA CAAGGGCGTA
CTGGTGCGCA CCCGTGTCTC CGAAATTCGC GAACTGGGCC GCGCCACGCA GGGCGTGACG
CTGATTGGGC TCGACGAAGG CTCCAAATTG AGCGGACTGC AGCGGATTGT CGAAAATGAC
GCCAACCCGG TGGCTGATGA AACCCCCGGT GACGATCAGG ACGACACCAG CAGCACCGAC
TAA
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| Protein sequence | MTQFAKETLP VSLEEEMRRS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHELNNDWN
RPYKKSARIV GDVIGKYHPH GDQSVYDTIV RMAQDFSMRH MLVDGQGNFG SVDGDNAAAM
RYTEIRLSKI AHELLADLDK ETVDFGPNYD GSEKEPLVLP TRLPNLLVNG SGGIAVGMAT
NIPPHNLNEV VDACLHLLRN PEASIDELME IIPAPDFPTA GIIYGIQGVK DGYRTGRGRV
VMRAKVHFED IDKGQRQSII VDELPYQVNK KTLQERMAEL VHEKKIEGIS HIQDESDKSG
MRLVIELKRG EVPEVVLNNL YKQTQLQDTF GMNMVALIDG QPKLCNLKDL IKVFLQHRRE
VVTRRTVFNL RKARERGHVL EGLAVALANI DEFIAIIRNA PTPPVAKVEL MAKPWDSKLV
REMLTRTRAD GGVINADDYR PDGLEKMYGM GSDGLYRLSD TQAQEILQMR LQRLTGLEQD
KIVAEYKEVM GEIEDLLDIL AKSERVSTII YEELTAIKTE FGQTKLGARR SLVEHSSFDL
STEDLITPTD MVVTLSHSGY IKSQPLSEYR AQKRGGRGKQ ATATKEDDWV DQLFIANTHD
YILCFSNRGR LYWLKVWEVP QGSRGSRGRP IVNMFPLQEG EKINVVLALT GEKRSFPADQ
YVFMATSMGT VKKTPLDEFS NPRKGGIIAV GLDEGDYLIG AALTDGKHDV MLFSDGGKAV
RFDENDVRPM GRNARGVRGM MLEDGQGVIA MLVAEDELQS VLTATVNGYG KRTSITEYTR
HGRGTKGMIA ITQSERNGKV VAATLVHADD EIMLITDKGV LVRTRVSEIR ELGRATQGVT
LIGLDEGSKL SGLQRIVEND ANPVADETPG DDQDDTSSTD
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