Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1567 |
Symbol | |
ID | 3963274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1692836 |
End bp | 1694845 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916390 |
Product | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase |
Protein accession | YP_522830 |
Protein GI | 89900359 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.484392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCCA CCGCGTTTCT TGATATTCCA CCGCTCACGG GAGTGAGCGG GACAGTTGTA TTACCCGGCT CCAAGAGCAT CTCCAACCGC GTGTTGCTGC TGTCGGCCCT GAGCGCCGGC CGCACCACGC TGATTGACCT GCTCGACTCC GACGACACCC GCGTCATGTT TGAGGCCTTG CGCGCGCTGG GGTGTGGTGT GCGGCAATCG GGCAGCACCG TCGAGATTGA GGGTCTGGGT GGCCAACTCG GGCACAGGCA GGCGGCGCTG TTCATGGGCA ACGCCGGCAC CGCGATTCGT CCGCTCACCG CCGCGCTGGC CGTTTTGGGC GGCGACTTTG AACTGCGCGG TGTGCCGCGC ATGCACGAAC GCCCGATTGG CGACCTGGTA GATGCACTGC GCCAAATCGG CTGCCACATC GATTACCTGG GACAGGACGG CTTTCCGCCG CTGCACATTG GCCGACCCAG CCTGAAGCTG GACACGCCGA TTCGCGTGCG GGGCGATGTG TCCAGCCAGT TTCTGACCGC ACTGCTGATG GCGCTGCCCT TGGTCGCAGC GACCCGCGAT ATTGTCATTG AGGTGGTCGG AGAGCTGATT TCGCGCCCTT ACATTGAAAT CACACTCAAC CTGCTGGCGC GCTTTAACGT GCGGGTGGTC CGCGATGGCT GGCAGCGCTT CACCATTCCC GCCGCCAGCC AGTTCCGCTC TCCTGGCACT TTGTTTGTTG AAGCTGACGC CTCGTCTGCT AGCTATTTCA TAGCTGCCGG CGCAATAGCA ACGGGGGCTG GAGGTCAAAA AGGCTTAAGG ATTGAAGGCG TGGGCGCAGA CTCCATCCAG GGCGACATCC GTTTCATCGA AGCCGCGCAG ATGATGGGCG CGCAGGTGCA GAGCGGCCCG AATTGGCTGG AAGTATCCAG AGGCTGCTGG CCACTCAAAG CCATTGACCT GGACTGCAAC CACATCCCGG ACGCCGCCAT GACACTTGCC ATGATGGCTT TGTACGCCCA GGGCAGCACC ACGCTGCGCA ACATCGCCAG CTGGCGCGTC AAGGAAACTG ACCGCATCGC GGCCATGGCG TGTGAGTTGC GCAAGCTCGG CGCCACGGTC GAAGAAGGCG CGGACTTCAT TCGCGTGACA CCGCCAGCCG TTGCCGCCGA CTGGCGCGCG GCCAGCATCC ACACCTATGA CGACCACCGC ATGGCGATGT GTTTTTCACT CGCCGCCTTC AACCCGGCCG GTCTGCCGGT GCGGATTGTT GACCCCAAAT GCGTGGCCAA GACCTTTCCC GATTATTTTG AAGCGCTGTT CTCGCTCGCG CAGACCTCAG CCCAGGCCAT TCCCGTGATT TGTGTCGATG GCCCAACCGC GTCCGGCAAG GGCACCTTGG CGGGCGCAGT GGCCCAGGCG CTGGGCTACC ATTTGCTCGA TTCCGGCTCG CTGTACCGGA TCACGGCTTT GGCGGCGTTG CAGGCTGGCC TGGCGCTGGA GTTCGCCCAT GAGCAGGCGA TCGCGGACTT GATTCCAGGT CTCTCCATCC GGTTCAGCCA GGACCAGGTG TTTTTGAACG GTGTTGACGT CAGCGAAGCT ATTCGCACCG AAGAGGCCGG CATGAATGCT TCCAGAGTCT CGGCACTGCC CAAGGTGCGC CTGGCTCTCA TCGCCTTGCA GCACAGTTTT CGCCAATTGC CCGGGCTGGT TGCTGACGGC CGCGACATGG GAACCATCAT CTTCCCTGAG GCCGCGCTCA AGGTGTTTTT GACTGCCAGC GCCGAAAAGA GAGCGCAGAG GCGTTATAAA CAATTGATTT CAAAGGGTAT TTCGGCTACA CTCTCGGGTC TTCGCGCGGA CTTGGAAGCA CGCGATGCAC GGGACACCTC CCGCAGCGTC GCGCCTCTCA AGCCAGCACA AGATGCCCAG CTGCTTGATA ACTCGGATTT AACGGTTGAA GAATCGGTCA ATCTGGTGTT GGACTGGTGG CAAAGCAAAC AGCCTTTCAG AGCAATCTGA
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Protein sequence | MFSTAFLDIP PLTGVSGTVV LPGSKSISNR VLLLSALSAG RTTLIDLLDS DDTRVMFEAL RALGCGVRQS GSTVEIEGLG GQLGHRQAAL FMGNAGTAIR PLTAALAVLG GDFELRGVPR MHERPIGDLV DALRQIGCHI DYLGQDGFPP LHIGRPSLKL DTPIRVRGDV SSQFLTALLM ALPLVAATRD IVIEVVGELI SRPYIEITLN LLARFNVRVV RDGWQRFTIP AASQFRSPGT LFVEADASSA SYFIAAGAIA TGAGGQKGLR IEGVGADSIQ GDIRFIEAAQ MMGAQVQSGP NWLEVSRGCW PLKAIDLDCN HIPDAAMTLA MMALYAQGST TLRNIASWRV KETDRIAAMA CELRKLGATV EEGADFIRVT PPAVAADWRA ASIHTYDDHR MAMCFSLAAF NPAGLPVRIV DPKCVAKTFP DYFEALFSLA QTSAQAIPVI CVDGPTASGK GTLAGAVAQA LGYHLLDSGS LYRITALAAL QAGLALEFAH EQAIADLIPG LSIRFSQDQV FLNGVDVSEA IRTEEAGMNA SRVSALPKVR LALIALQHSF RQLPGLVADG RDMGTIIFPE AALKVFLTAS AEKRAQRRYK QLISKGISAT LSGLRADLEA RDARDTSRSV APLKPAQDAQ LLDNSDLTVE ESVNLVLDWW QSKQPFRAI
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