| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1566 |
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| Symbol | rpsA |
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| ID | 3963273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1691006 |
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| End bp | 1692706 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916389 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_522829 |
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| Protein GI | 89900358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACC CAAAAATGTC AGAATCTTTT GCCGCCCTAT TTGAAGAGTC CCTACAACGC
ACCGAAATGC GTCCGGGCGA AGTCATCACT GCTGAAGTGG TTCGTATCGA GCACAGCTTT
GTGGTTGTCA ACGCTGGCCT CAAGTCTGAA GCCTACGTGC CGCTCGAAGA GTTCAAGAAT
GACAAGGGCG AAATCGAAGT CCAGGTCGGC GACTTCGTGT CGGTGGCCAT TGGCTCCATC
GAAAACGGCT ACGGCGACAC CATTCTGTCG CGCGACACCG CCAAGCGTCT GGCTTCGTGG
ATGAGCCTGG AAAAAGCCCT GGAAACCGGC GAATTTGTCA CCGGCACCAC CAGCGGCAAA
GTCAAGGGTG GCTTGACCGT GCTGGTCAAC GGCATTCGCG CCTTCCTGCC CGGCTCACTG
GTTGACACCC GTCCCACCAA AGACCTGTCA CCGTACGAAA ACAAGACCCT CGAATTCAAG
GTCATCAAGC TCGACCGCAA GCGCAACAAC GTCGTGCTGT CACGCCGTGC CGTGGTGGAA
GCCAGCATGG GCGAAGAACG CGCCAAGCTG ATGAACACCC TGAAGGAAGG CGCCATTGTG
CAAGGCGTGG TCAAGAACAT CACCGAATAC GGTGCGTTTG TGGATCTGGG CGGCATTGAC
GGTCTGCTGC ATATCACCGA CATGGCATGG CGTCGTGTGC GTCACCCGAG CGAAGTGGTA
ACCGCCGGCC AGGAAATCAC GGCCAAGATC CTCAAGTTCG ACACCGAGAA GAACCGCGTG
TCGCTGGGTC TCAAGCAGCT GGGCGACGAC CCCTGGATGG GCGTCAACCG CCGCTACCCG
CAAGGCACCC GCATGTTCGG CAAGATCACC AACATCGCCG ACTACGGCGC GTTTGTGGAA
CTCGAACCCG GCATCGAAGG CCTGGTGCAC GTGTCCGAGA TGGACTGGAC CAACAAGAAC
ATTGCACCCG CCAAGATCGT GGCCCTGGGT GATGAAGTCG AAGTCATGGT GTTGGAAATC
GACGAAGACA AGCGTCGTAT CTCCCTGGGC ATGAAGCAAT GCAAGGCCAA CCCTTGGCAA
GAGTTTGCTC AAAATACCAA ACGCGGCGAT CGCGTCAAGG GCCCGATCAA GTCGATCACC
GACTTCGGCG TGTTTGTCGG CCTGGCCGCT GGCATCGACG GTCTGGTGCA TTTGTCTGAC
CTGTCCTGGA ACGAAACCGG CGAAGCCGCT GTGCGCGAAT ACAAAAAGGG CCAGGAAGTC
GAAGCCCTGG TGCTGGCCGT GGATGTGGAC CGTGAGCGCA TCTCGCTGGG TATCAAGCAG
CTCGATTCCG ATCCGTTCAC CACTTTCGCC ACCATCAACG ACAAGGGTCA AGTGGTCACC
GGCAAGGTCA AGACGGTGGA TGCCAAGGGC GCTGAAATCG ATCTCGGCGA CGACATCATC
GGCTACCTGC GCGCCAGCGA AATCTCCCGC GACCGCGTGG AAGATGCTCG CAACGTGCTC
AAGGAAGGCG ACGAAGTCAC GGCTGTTGTG GTCAATGTGG ATCGCAAGAC CCGCAACATC
CAGCTGTCCA TCAAGGCCAA GGATGCGGCT GATCAAAACG AAGCCATGGC CACTTTGAGC
CAGTCCTCTG CCCGCGAAAA CGCTGGCACG ACCAGTCTGG GTGCTTTGCT GCGCGCCAAG
CTGGACAACA CCGAAAAGTA A
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| Protein sequence | MPHPKMSESF AALFEESLQR TEMRPGEVIT AEVVRIEHSF VVVNAGLKSE AYVPLEEFKN
DKGEIEVQVG DFVSVAIGSI ENGYGDTILS RDTAKRLASW MSLEKALETG EFVTGTTSGK
VKGGLTVLVN GIRAFLPGSL VDTRPTKDLS PYENKTLEFK VIKLDRKRNN VVLSRRAVVE
ASMGEERAKL MNTLKEGAIV QGVVKNITEY GAFVDLGGID GLLHITDMAW RRVRHPSEVV
TAGQEITAKI LKFDTEKNRV SLGLKQLGDD PWMGVNRRYP QGTRMFGKIT NIADYGAFVE
LEPGIEGLVH VSEMDWTNKN IAPAKIVALG DEVEVMVLEI DEDKRRISLG MKQCKANPWQ
EFAQNTKRGD RVKGPIKSIT DFGVFVGLAA GIDGLVHLSD LSWNETGEAA VREYKKGQEV
EALVLAVDVD RERISLGIKQ LDSDPFTTFA TINDKGQVVT GKVKTVDAKG AEIDLGDDII
GYLRASEISR DRVEDARNVL KEGDEVTAVV VNVDRKTRNI QLSIKAKDAA DQNEAMATLS
QSSARENAGT TSLGALLRAK LDNTEK
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