| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1560 |
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| Symbol | |
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| ID | 3963267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1686266 |
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| End bp | 1687132 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637916383 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_522823 |
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| Protein GI | 89900352 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTGGA TTGAGGAACA ACACCTGAGC AGTTCCAATC GACATCAGCG TTGGTGGCTG
GGGCTCAGTA TCGCGCTGTT GTCGGGCTTG GTCATTTTTG TCTCGACCAT TGTTGCGGTG
ACCGGACAAC CGATGGCGGC GCTGCTGACC GTTTGTTCGA TGGTGCTGAT CGGGATTTCT
TTTGTGTTGT ACCGCCGGTT GCACTTGGCA CGGTTGCAGC GTGAGGAGGT GCTGGCCTTG
TTGAGCAGAA AACAATGGCC GACGTGCGAG GGACTGTGTC ACCTGGAGTC CAGCCTGGCC
AAGTGTGCAG CGCGCCGGAT ACAGGTGCTG CAAGCCGAGA TTGCCGACCT GCAAGACAGA
GAGCAACGAC TGAAAGTGCA AGCCCATCAT GATGGTTTGA CTGGTCTGGC CAACCGGTTC
CTCCTGACGG ACCGTTTTCA GTTCACCGTG GAGCGGGCCA AGCGCAGTGG CCAATCCTTT
GCTCTTTTAA TGGTTGACTT GAATGACTTC AAGGCCATCA ATGATCACCA TGGTCATGTC
GCCGGAGACG AGGTCTTGGT CGTCACAGCG CAGCGCTTGT CGAGTGCGGT ACGCGCGTCC
GATACAGTGG CCCGGATTGG CGGCGACGAG TTTGTGTTGA TTATTGAATC AATCGAAGAT
CCGCAAGAGA TGTTGCATAT CGGAGAGAAA CTGTTTGATA TGCTGACCGA CCCAATCACC
CTGAACACGG GCGTGGTTGC GAAACTGGGG GCAAGTATCG GCTTGGCTTT GTACCCGGAT
GATGGGGCTA GCCTGAATGA CTTGCTGAAT GTCGCCGATC AAGCCATGTA CGAGTGTAAA
TCGACCGGTT CCATGAGCCT CCAGTAA
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| Protein sequence | MSWIEEQHLS SSNRHQRWWL GLSIALLSGL VIFVSTIVAV TGQPMAALLT VCSMVLIGIS
FVLYRRLHLA RLQREEVLAL LSRKQWPTCE GLCHLESSLA KCAARRIQVL QAEIADLQDR
EQRLKVQAHH DGLTGLANRF LLTDRFQFTV ERAKRSGQSF ALLMVDLNDF KAINDHHGHV
AGDEVLVVTA QRLSSAVRAS DTVARIGGDE FVLIIESIED PQEMLHIGEK LFDMLTDPIT
LNTGVVAKLG ASIGLALYPD DGASLNDLLN VADQAMYECK STGSMSLQ
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