Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1556 |
Symbol | |
ID | 3960546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1678911 |
End bp | 1681352 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637916376 |
Product | ATP-dependent protease La |
Protein accession | YP_522819 |
Protein GI | 89900348 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGTC ATACCCATTT GCCTGCTACT CCTTTGGATT TGCCATTGCT GCCACTGCGT GACGTGGTCG TGTTTCCGCA CATGGTGATT CCACTTTTTG TCGGTCGGCC CAAGAGCATC AAGGCGCTGG AAGCAGCCAT GGAGTCTGAG CGCCGGATTA TGCTGGTGGC CCAAAAAACG GCTGCCAAGG ACGATCCGCT GGTCACCGAC ATGTTTGATG TCGGCTGTGT CTCTACCATC CTGCAAATGC TCAAGCTGCC CGACGGCACG GTCAAGGTGC TGGTTGAAGG CCAGCAGCGC GCACGTGTCA ACAAAATTGA AGATGGTGAG TTGCATTTTT CAGCCAACGT CACGCCGATT GAAGTGCTGA TTGAGCCCGA CACCAAATCA CGTGGCAAAG CCAGTGAAAT CGAGGCTTTG CGCCGTGCCG TGATGCAGCA GTTTGATCAG TACGTCAAGC TCAACAAGAA GATCCCACCT GAGATTCTGA CCTCTATTTC AAGCATTGAT GATGCAGGCC GCATGGCCGA TACCATCGCC GCGCATTTGC CGCTCAAGCT CGACAGCAAG CAAGCTGTAT TGGGTCTCTC GGGTGTCAAA GAACGTCTGG AAAATCTGTT TGAGCAGATC GAGCGTGAAG TTGACATCTT GAATGTTGAT AAAAAAATCC GGGGCCGCGT CAAGCGGCAG ATGGAGAAGA ATCAGCGCGA TTTCTACCTG AATGAACAGG TGAAAGCGAT TCAGAAAGAA CTGGGTGAAG GTGAAGATGG CGCCGACATC GACGAAATTG AGAAAAAAAT CAAGTCGGCC AAAATGCCCA AAGAAGCGCT GAAAAAGGCG GAAGGTGAAC TGAAAAAGCT GAAATTGATG TCGCCCATGT CGGCAGAAGC GGCCGTTGTG CGTAATTACA TTGATGTATT GACCGGCTTG CCGTGGGCCA GCAAAACCAA GATCAAACAT GATCTTGGCA ATGCAGAAAA GGTGCTCGAC GAAGACCACT ACGGGCTGGA CAAGGTGAAA GACCGCATTG TTGAGTATCT GGCGGTGCAG CAACGGGTTG AAAAAGTCAA GGCGCCCATT TTGTGTCTGG TCGGACCGCC GGGTGTTGGC AAGACGTCAT TGGGGCAGTC CATTGCCAAG GCGACCGGGC GCAAGTATGT ACGGGTGGCC TTGGGCGGCA TGCGCGACGA GGCGGAAATT CGCGGCCACC GCCGCACTTA TATCGGCGCC ATGCCGGGCA AGGTGATGCA GAGCCTGGCG AAGGTTGGCA CGCGCAACCC ACTGTTTTTG CTGGACGAGA TTGACAAGCT GGGAACCGAC TTTCGCGGTG ATCCATCGAG CGCCTTGTTG GAGGTGCTGG ACCCGGAGCA AAACCACAAG TTTGGTGACC ATTACGTCGA GGTTGATTTT GATTTGAGCG ACGTCATGTT CGTGGCCACG TCCAACTCCA TGAATATTCC GTCGGCCCTG CTCGATCGCA TGGAAGTGAT TCGCCTGTCT GGGTATACCG AAGACGAAAA AACCAACATC GCCCTCAAGT ACCTGTTGCC CAAGCAGCTC AAGAACAATG GTGTCAAGGA AGAAGAGTTG TTGGTTGGCG AAGATGCCGT GCGTGACATC GTTCGCTACT ACACCCGTGA GGCTGGTGTA CGTTCGCTGG AGCGTGAGCT CTCGAAAATC TGCCGCAAGG TGGTGAAGGG CCTGTTGCTC AAGAAGATGA CGCCAAAGGT GACGGTGAAT GCCGACAACC TCAATGATTT TCTGGGCGTT CGCAAGTACG ACTATGGTCG CGCTGAGCAA AAGAATCAGG TCGGCCAGGT GGTGGGATTG GCTTGGACAG AGGTCGGCGG CGATTTGCTG ACGATCGAGG CTGCCATGAT GCCCGGCAAG GGTGTCATCA CGCGCACGGG TTCACTGGGC GACGTGATGA AGGAGTCGGT TGAGGCTGCA CGCACGGTGG TGCGCAGCCG CTCGCGCCGA TTGGGCATCA AGGACGAGTT TTTCGAAAAG AAAGATATCC ATATTCACGT GCCTGACGGT GCTACGCCCA AAGACGGCCC GAGTGCTGGT GCCGCGATGA CGACAGCCTT TGTTTCTGCC ATGACGGGTA TTCCGGTGCG TGGTGATGTG GCCATGACGG GTGAAATAAC CTTGCGCGGG GAAGTAACTG CCATTGGGGG TCTGAAGGAG AAGTTGTTGG CGGCTTTGCG AGGGGGTATC AAGACTGTTC TGATTCCCGA GGAGAACGCT AAAGACCTGC AGGATATTCC CGAGAACGTA AAAAACGGGT TAGAGATTGT GCCCGTGCGC TGGATCGACA AGGTGCTCGA AGTGGCATTG GAGAGAATGC CGACGCCCCT GTCTGACGAG GACTTGGCGG TGGCCGCCGC TGCACCAGTC GTGGTGCCGG TGCCTGAGTC GGGAGTGTCC ATCAAGCATT GA
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Protein sequence | MSGHTHLPAT PLDLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMESE RRIMLVAQKT AAKDDPLVTD MFDVGCVSTI LQMLKLPDGT VKVLVEGQQR ARVNKIEDGE LHFSANVTPI EVLIEPDTKS RGKASEIEAL RRAVMQQFDQ YVKLNKKIPP EILTSISSID DAGRMADTIA AHLPLKLDSK QAVLGLSGVK ERLENLFEQI EREVDILNVD KKIRGRVKRQ MEKNQRDFYL NEQVKAIQKE LGEGEDGADI DEIEKKIKSA KMPKEALKKA EGELKKLKLM SPMSAEAAVV RNYIDVLTGL PWASKTKIKH DLGNAEKVLD EDHYGLDKVK DRIVEYLAVQ QRVEKVKAPI LCLVGPPGVG KTSLGQSIAK ATGRKYVRVA LGGMRDEAEI RGHRRTYIGA MPGKVMQSLA KVGTRNPLFL LDEIDKLGTD FRGDPSSALL EVLDPEQNHK FGDHYVEVDF DLSDVMFVAT SNSMNIPSAL LDRMEVIRLS GYTEDEKTNI ALKYLLPKQL KNNGVKEEEL LVGEDAVRDI VRYYTREAGV RSLERELSKI CRKVVKGLLL KKMTPKVTVN ADNLNDFLGV RKYDYGRAEQ KNQVGQVVGL AWTEVGGDLL TIEAAMMPGK GVITRTGSLG DVMKESVEAA RTVVRSRSRR LGIKDEFFEK KDIHIHVPDG ATPKDGPSAG AAMTTAFVSA MTGIPVRGDV AMTGEITLRG EVTAIGGLKE KLLAALRGGI KTVLIPEENA KDLQDIPENV KNGLEIVPVR WIDKVLEVAL ERMPTPLSDE DLAVAAAAPV VVPVPESGVS IKH
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