Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1554 |
Symbol | |
ID | 3960544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1676888 |
End bp | 1677517 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637916374 |
Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
Protein accession | YP_522817 |
Protein GI | 89900346 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTGC CGAACATGAT GATGGGTGCA ATGCAAACGC AAGCTTTGGG CATGGTGCCC ATGGTGATTG AGCAGTCAGG GCGCGGCGAG CGGTCTTACG ACATTTACTC GCGGCTACTG AAGGAGCGTG TCATTTTTTT GGTCGGTCCA GTCAACGACT ATGTGGCCAA TCTGGTGGTG GCGCAATTGC TGTTCCTGGA AAGCGACAAC CCGGATAAGG ATATATCGTT CTATATCAAC TCGCCGGGCG GCTCGGTCAG CGCTGGCATG GCGATTTTTG ACACAATGAA CTTTGTCAAG CCCGATGTAT CTACCTTGTG TACAGGTATG GCCGCCAGCA TGGGTGCATT TTTGCTGGCT GCCGGGGCCA AAGGCAAACG TTTCTCACTG CCTAACTCCA AGGTCATGAT TCATCAACCC TCGGGCGGCA GTCAGGGGCA GGCGACGGAG ATCGAAATTC AGGCGCGCGA GATTTTGAAA ACCCGCGAGC AACTGAATAA GATTCTGGCC GAGCGCACCG GCCAGCCGTT GGCGCGTATT GAGCGCGACA CCGAGCGCGA CTATTACATG TCGGCGGACG AGTGCAAAGA ATATGGCCTG ATTGACCAGG TCATCTCGAA AAGGGCATAG
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Protein sequence | MSLPNMMMGA MQTQALGMVP MVIEQSGRGE RSYDIYSRLL KERVIFLVGP VNDYVANLVV AQLLFLESDN PDKDISFYIN SPGGSVSAGM AIFDTMNFVK PDVSTLCTGM AASMGAFLLA AGAKGKRFSL PNSKVMIHQP SGGSQGQATE IEIQAREILK TREQLNKILA ERTGQPLARI ERDTERDYYM SADECKEYGL IDQVISKRA
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