| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1548 |
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| Symbol | |
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| ID | 3960537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1667089 |
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| End bp | 1668393 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637916367 |
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| Product | amine oxidase |
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| Protein accession | YP_522811 |
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| Protein GI | 89900340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2907] Predicted NAD/FAD-binding protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG CCATCATCGG CGCCGGCTGG GCCGGCCTTG CCGCCGCAGT CACAGCCACG
CAAGCCGGTC ACCATGCGAC TATTTTCGAA GCGACTCACA CCATCGGCGG GCGGGCCAGA
GCCGTCAAAG GCACATTGCC CGACGGCACC CCCGTCACAC TGGACAACGG CCAGCACATT
CTGATTGGCG CCTACACCGA GACCCTGCGC CTGATGCGCC TGGTCGGGGT GGAGACAACG
ACCGCCCTGC TCCAGCAACC CATGACCCTG CTGTTCCCCG ACGGCCTGGG CGTGCGCTTT
GCCGCCTGGC CGACGCCGCT GGACGCCCTG GCGGGCATCG TGCGTGCCCG TGGCTGGAGC
GTGCGCGACA AATGGTCCTT GCTGCGTGCG GCCACGGCCT GGCAACTGGC GGGTTTCCAG
TGCGACGCCC GCAGCAGCGT CGCCCAACTC TGCCAGGCCT TGCGCCCGCG TGTGATGGCG
GAGCTGATTG AGCCGCTGTG TGTGTCGGCC CTCAACACCC CGGCCGCGCG GGCCAGCGCC
AGCGTGTTTT TGCGCGTCAT GCAAGACGCC TTGTTGGGTG TGCAGGGCGG CTCCCGGCTG
CTGCTGCCTC GGCTTGATCT CTCCCAGCTG TTTCCCGACG CAGCGGCCCT TTGGCTCACG
CAACGCGGTG CGCAGCTGCA CGTGGGCGCG CGGGTCGCCA CCATCGAGCC CCAAGGCGCG
CAGTGGCGAG TGCACGGCGG GCCACTGCCG GAAGCCCTGT TTGACGCGGT GATTGTCGCG
ACTTCAGCCT CAGAATCGGC CCGAGCCCTT GATAACACGG CGCAAGCAGC TCCTGATTCA
ATAGCCAATG AAATCCGGCA CTGGACGCAG GCCTGCCGCG CCCTGCAGTT CGAATCCATC
GCCACCGTCT ATGCCTGGGG CCTGGGCGCC ACCCTGCCCG AGCCGATGCT GAGCCTGCGC
AGCCACGCGG CTGCCCCAGC CCAGTTTGTT TTTGACCGCG GCCAGCTGGG GGGCCCAAGC
GGCCTGTTGG CCTTTGTGGT GAGCGCCAGC AGCGCCGGTA CGGCCACCTT GCAGACGCAA
GTGCTGCAGC AGGCCCAACA ACAGCTCGGC CTGGCGCTGC AAGCGGTGCA AACCATTCAG
GAAAAACGCG CCACCTTTGC CTGCACACCC GGGCTGCAAC GCCCTGCCCT GCGCATCGCA
CCCGGCCTGC TCGCTTGTGG CGACTACGTG GCAGGCCCTT ACCCGGCCAC GCTGGAGGGC
GCCGTGCGCA GCGGCATGGC GGCGGTGGCA GCGGCCGTGG CCTGA
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| Protein sequence | MKIAIIGAGW AGLAAAVTAT QAGHHATIFE ATHTIGGRAR AVKGTLPDGT PVTLDNGQHI
LIGAYTETLR LMRLVGVETT TALLQQPMTL LFPDGLGVRF AAWPTPLDAL AGIVRARGWS
VRDKWSLLRA ATAWQLAGFQ CDARSSVAQL CQALRPRVMA ELIEPLCVSA LNTPAARASA
SVFLRVMQDA LLGVQGGSRL LLPRLDLSQL FPDAAALWLT QRGAQLHVGA RVATIEPQGA
QWRVHGGPLP EALFDAVIVA TSASESARAL DNTAQAAPDS IANEIRHWTQ ACRALQFESI
ATVYAWGLGA TLPEPMLSLR SHAAAPAQFV FDRGQLGGPS GLLAFVVSAS SAGTATLQTQ
VLQQAQQQLG LALQAVQTIQ EKRATFACTP GLQRPALRIA PGLLACGDYV AGPYPATLEG
AVRSGMAAVA AAVA
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