| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1546 |
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| Symbol | |
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| ID | 3960535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1663095 |
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| End bp | 1664009 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916365 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_522809 |
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| Protein GI | 89900338 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAATT CAGTCATGAA CACTCTACCC CCCCTGCCTT GTTACCTCAA CGGCGAGTTC
ACCGAACTCC CCAATGCCAA GATCAGCGTC ATGGACCGTG GCTTCATTTT TGGCGACGGC
GTCTATGAAG TGGTGCCGGT GTATGGCGGC CAGTTGTTCC GCTTTGCCCA GCACATGGCG
CGGCTCGACC GCAGCCTGGC CGAGTTGCGT ATTGCCAATC CGTTGACACC TGCCCAGTGG
GCTGAAATTG CTCATAAATT AATAGTTACT CATGCCGATT CCACGGGGGC TAGCGTCCAA
AACATCGATC AACTGATCTA CATCCAGATC ACCCGCGGTG TCGCCATGCG CGACCATGTC
ATGCCGACCG ACATCACGCC CACCGTGTTC GTCATGATCA ATGCCATGAA GCTCCCTAGC
GAGGCGATGC GCAGCCAGGG CGTGGCCTGC GTGACGGCGG ATGACTTCCG CTGGGAAAAA
GCCCACATCA AAAGCACCAG CCTGCTGGGC TCGGTGTTGG CGCGCCAGAT CAGCTTTGAC
GCCGGCGCGA CGGAGACCAT CATGTTCCGC GACGGCTTTT TAAGTGAAGC GGCGGCCAGC
AACGTCTGGG TTGTCAAAGG CGGCAAGGTG CTGGGCACGC CCAAAGACAA CCTGGTGCTC
GAAGGCATTC GTTACCGCTT GATTGAAGAC ATCTGCCGTG CCCGCGGTAT TCCTTTTGAG
CTGCGTCGCC TGAGCCGTGA AGAAGTGAGG GACGCCGACG AACTGCTGCT GTCGTCTGCG
ACCAAAGAGG TGTTGCCGGT GACAACGCTG GACGGCAAGC CAGTGGGCCA GGGCAAGCCC
GGTCCCGTCT ATGCGCAGCT GTACGCGGGT TACAGCGAAG CCAAGGCGCA GTCGCGGCAG
TCGCCCACCG CCTGA
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| Protein sequence | MDNSVMNTLP PLPCYLNGEF TELPNAKISV MDRGFIFGDG VYEVVPVYGG QLFRFAQHMA
RLDRSLAELR IANPLTPAQW AEIAHKLIVT HADSTGASVQ NIDQLIYIQI TRGVAMRDHV
MPTDITPTVF VMINAMKLPS EAMRSQGVAC VTADDFRWEK AHIKSTSLLG SVLARQISFD
AGATETIMFR DGFLSEAAAS NVWVVKGGKV LGTPKDNLVL EGIRYRLIED ICRARGIPFE
LRRLSREEVR DADELLLSSA TKEVLPVTTL DGKPVGQGKP GPVYAQLYAG YSEAKAQSRQ
SPTA
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