| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1520 |
|---|
| Symbol | |
|---|
| ID | 3960674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1637295 |
|---|
| End bp | 1638338 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637916339 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_522783 |
|---|
| Protein GI | 89900312 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGT TGCACACCGC CATTGCCCTG ATTGAAGCCG ACTACCAGCG CAGCGCTGAC
ACGCATCTGA TCGCCCTGCC CCTGCCGGGC TTTGCCCGCT GCGGCATTGA CCTGTATTTG
AAGGACGAGT CCACGCACCC GACCGGCAGC CTCAAGCACC GGTTGGCGCG TTCGCTGTTC
TTGTACGCGC TGTGCAATGG CTGGCTGCAC GCGGGCTCAA CCGTGGTGGA ATCAAGCAGC
GGCTCCACGG CGGTGAGCGA AGCCTACTTT GCGCGGCTGC TGGGCTTGCC GTTTATTGCC
GTCATGCCGC AGAACACGTC GCCCGAGAAG ATCGCCCAAA TCACGTTTTA TGGCGGGCGC
TGCCATCTGG TGGACAGCGC CAGTGCGGTC TACGACGAAG CCCGCACGCT GGCCGCGCAA
ACCGGTGGCC ATTACATGGA CCAGTTCACC TATGCCGAGC GCGCCACCGA CTGGCGCGGC
AACAACAACA TTGCGCAAAG CATGTTCACG CAGATGGCGC GGGAGCGCCA CCCGGTGCCG
CGCTGGATTG TGGTCGGTGC GGGCACCGGC GGCACCAGCG CCACGATTGG CCGTTATGTG
CGCCACCAGC GCCATGCGAC CCAGGTTTGC GTACCCGACC CGCAAGGATC GGTATTTGGC
GAGTTTCACC GCACGGGCGA CGCCAGCCTG ACGGGACCGG GTTCGCGCAT CGAAGGCATT
GGCCGCCCCC GGGTGGAGGC CAGCTTTATC CGCACGCTGG TTGACCGCAT GCTGGAAGTC
AGCGACGTCG ATTCGGTGGC CGCCATGCGT GTGTTGTCTC ACCTGCTCGG CCGCAAAGTC
GGGCCCTCAA CGGGCACCAA TTTTGTCGGC ATGTTGATCC TGGCCAACGA GATGCGCTCG
CAGGGCCAGC AAGGCGCCAT TCTGTCGCTG CTGTGTGACG CCGGCGAGCG CTACCTTGCC
AGCTACTTTG ATCCCGACTG GGTGCGCCAG CATCTGGGTG ACTGCACGGC GGCGGCGACG
CACATCCAGT CCCAATTGTC CTGA
|
|---|
| Protein sequence | MNWLHTAIAL IEADYQRSAD THLIALPLPG FARCGIDLYL KDESTHPTGS LKHRLARSLF
LYALCNGWLH AGSTVVESSS GSTAVSEAYF ARLLGLPFIA VMPQNTSPEK IAQITFYGGR
CHLVDSASAV YDEARTLAAQ TGGHYMDQFT YAERATDWRG NNNIAQSMFT QMARERHPVP
RWIVVGAGTG GTSATIGRYV RHQRHATQVC VPDPQGSVFG EFHRTGDASL TGPGSRIEGI
GRPRVEASFI RTLVDRMLEV SDVDSVAAMR VLSHLLGRKV GPSTGTNFVG MLILANEMRS
QGQQGAILSL LCDAGERYLA SYFDPDWVRQ HLGDCTAAAT HIQSQLS
|
|---|
| |