| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1516 |
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| Symbol | |
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| ID | 3961131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1633008 |
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| End bp | 1634591 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916336 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_522780 |
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| Protein GI | 89900309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTG CCACGCCTTT CAACCCGCCA CCGCTGCAAG GTTCGGCTCG CCTGTGGGGC
ACCATCGCCG TCTCGTTGGC GACCTTCATG AACGTGCTCG ACTCGTCGAT TGCCAACGTG
TCGCTGCCCG CCATCGCCGG CGATCTGGGG GTGAGCGCCA ACCAGGGCAC CTGGGTCATC
ACCAGCTTTG GCGTCGCCAA CGCCATTGCC CTGCCGCTCA CCGGCTGGTT GTCGCAGCGT
TTTGGCCAGG TGCGCCTGTT CATCACCAGT GTCTTGCTGT TTGTGCTGAG CTCCTGGCTG
TGTGGGCTGG CACCGAACAT GACCATGCTC ATCATCTTCC GGGTCATGCA GGGTTTCGTG
GCGGGGCCGA TGATCCCGCT CTCGCAGGGC TTGCTGCTGT CGAGCTACCC GCCCGCGCTG
GCGGGCCTGG CGATGGGCTT GTGGGCCATT ACCACGCTGG TGGCACCGGT CGTGGGTCCG
CTGCTGGGCG GCTGGATCAC CGACAACATC AACTGGTCCT GGATTTTTTA TATCAACATC
CCGTTTGGTC TGCTGTCAGC CTTCATGGTC TGGTCGATCT ACCGCAAGCG TGAGAGTGTC
ATACGCAAAT TGCCGATTGA CTCGGTCGGT CTGGGTCTGC TGGTGATCTG GGTCGGCGCT
TTGCAGATCA TGCTCGACAA AGGCAAGGAG CTCGACTGGT TTCATTCACC GGAGGTGGTC
GGCTTGGGGT TGGTGGCGCT GGTGGGGTGC GCCATTTTTC TGGCCTGGGA ACTCACGGCC
GAACACCCGG TGGTTGATCT GCACCTGTTC AAGCGGCGCA ATTTCTGGTC TGGCACGCTG
GCGATTGCGG TCGGCTACGG TTTATTTTTT GGCAATGTCG TCTTGCTGCC CCTGTGGCTG
CAGCAGTTCA TGGGCTATCC GTCGATTGAC GCGGGCATGC TGTTGGCACC GGTGGGCCTG
CTCGCCATTA TCCTGTCGCC GATCGTGGGC AAGAACGTGA ACCGGGTCGA TCCGCGCTGG
CTGGCCAGCT TTGCGTTTGT GGTGTTTGCG GTGGTGCTGC TGATGCGCTC GCAGTTCAAC
ACCCAGGCCG ACTTTGGCAC CATGATGCTG CCGACGATCA TTCAGGGCAT CGCGATGGCG
TTCTTCTTCA TTCCTTTGTC GGTCATCTTG CTGTCAGGCA TTACGCCCGA CAAGATCCCC
GCCGCCTCCG GTCTGTCGAG TTTTGTGCGG ATTGTGGCGG GGTCGTTTGG TACGTCGATT
GCGACGACCG TCTGGCAAGA CCGTGCCGCC ATGCACCACG CGCAGTTGGC TGAATCCATC
CACCAAGGCA GCGCCACGGC CACGCAGGTG CTGGCCGGCA TGCGCAACGC GGGGCTGACG
CCTGAGCAGG CGCTGGCGCA GGTCAACCGG CTGATTGATC AGCAGGCCTA TATGTTGGCC
ATTGACGATG TATTTTTTGC ATCGGCGATG ATTTTTCTGC TGCTGATACC GGTGGTGTGG
TTTGCCAGGC CCAAACTCGC TGGCAGTGCA GGCGGCGCCG GCGGTTCAGG CAGCAATGTC
GATGCCGCCG TTGGGGCGCA TTGA
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| Protein sequence | MSTATPFNPP PLQGSARLWG TIAVSLATFM NVLDSSIANV SLPAIAGDLG VSANQGTWVI
TSFGVANAIA LPLTGWLSQR FGQVRLFITS VLLFVLSSWL CGLAPNMTML IIFRVMQGFV
AGPMIPLSQG LLLSSYPPAL AGLAMGLWAI TTLVAPVVGP LLGGWITDNI NWSWIFYINI
PFGLLSAFMV WSIYRKRESV IRKLPIDSVG LGLLVIWVGA LQIMLDKGKE LDWFHSPEVV
GLGLVALVGC AIFLAWELTA EHPVVDLHLF KRRNFWSGTL AIAVGYGLFF GNVVLLPLWL
QQFMGYPSID AGMLLAPVGL LAIILSPIVG KNVNRVDPRW LASFAFVVFA VVLLMRSQFN
TQADFGTMML PTIIQGIAMA FFFIPLSVIL LSGITPDKIP AASGLSSFVR IVAGSFGTSI
ATTVWQDRAA MHHAQLAESI HQGSATATQV LAGMRNAGLT PEQALAQVNR LIDQQAYMLA
IDDVFFASAM IFLLLIPVVW FARPKLAGSA GGAGGSGSNV DAAVGAH
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