Gene Rfer_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1513 
Symbol 
ID3961128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1629704 
End bp1630291 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content62% 
IMG OID637916333 
ProductMarR family transcriptional regulator 
Protein accessionYP_522777 
Protein GI89900306 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0139337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCT CGCGAACACC CCTCAAGTCC GACCCGCCGC GCTCTGCGGC GGCTGGCGTC 
GAGCCGATCC AAGAGTCTTG TGCCGCCATT GCGTTTTATT GCGCCGATGG TTACAAGCCC 
GAGGAGAGCG TGGGTTATTT GATGCGACGC GTGCTGGCCC TGGTGGCGCA AGAAGTCGAG 
CGTCAACTCG AAACCAGTGA CCTGACCAAT GCGCAATGGG TACCGCTGTT CAAGCTCTCC 
ATGGGCAAGG TGTCCACTGT CGCCGAGCTG GCGCGCGAAT GCCATCTGGA CCCTGGTGCC 
ATGACCCGGC TGCTGGATCG GCTGGAGGCC AAGGGCCTGT GTCGCCGTGT GCGTTCGGTG 
GCGGACCGGC GTGTTGTCCA TATCGAGCTG ACGCCAGTCG GCCTTGATGC AGCGGCCGCC 
CTGCCTGCGG TGCTCAGCCG TGTACAAAAT GCCCATCTGG CCGGTTTCTC GGTCGAAGAG 
TTTGAAGCCT TGAAGGGCTT TTTGCGGCGC ATCCTGGACA ACGCGCAGAC TCAAGCACAG 
ACCTTGGCCC CGAGCCAGAC CATTTCAGGA GACCCAGATG CACCGTGA
 
Protein sequence
MKPSRTPLKS DPPRSAAAGV EPIQESCAAI AFYCADGYKP EESVGYLMRR VLALVAQEVE 
RQLETSDLTN AQWVPLFKLS MGKVSTVAEL ARECHLDPGA MTRLLDRLEA KGLCRRVRSV 
ADRRVVHIEL TPVGLDAAAA LPAVLSRVQN AHLAGFSVEE FEALKGFLRR ILDNAQTQAQ 
TLAPSQTISG DPDAP