| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1509 |
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| Symbol | |
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| ID | 3961124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1622497 |
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| End bp | 1627269 |
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| Gene Length | 4773 bp |
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| Protein Length | 1590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916329 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_522773 |
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| Protein GI | 89900302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.869455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCATC CCGCGCTTAC CGAACTGCTG ACCTATACCC AGGAGCATGC CGGGCCTGAT
GCCAACCGGC TTGCTGATTT TGTATTGGCC TATTTCGAGA ATGCTGACCC GGATGAAATA
CAGGCTCGTG GTCCCGCAAC TTTGTTTGCG ATTGCCAATG CACACTGGCG CTTGGCTGAT
GGCCCGTGTG CACCGCAAAG CGCCAGGATT CGCGTGTTCA ATCCGACCTT GGCGGAAGAT
GGTTTTGTGA GCGAGCACAC CGCCATCCAG ATTGTTCATG ATGACATGCC ATTTTTGGTG
GACTCGGTCA CCATGGCCGT CAACCGCAGT GGCCGAACCG CGCACTGGAT TGTCCATCCA
TTGCTCAGTG TGCAACGCGA TAAACAAGGC CACTTGGTCA AGACCGCCAG CGCAGCGCAT
CTCGGCGAGC AAACCAGCCC GATGGCATCC TTCATTCTGG TGGAATGTGA TCGCATTGTG
AGCGAGGTTG ATCGCGCTGC ATTGGCCGGT GAACTGGCGC GCATCTTGGG GGATGTGCGT
GCGACGGTCT ACGACTGGCA ACCCATGTTG AATCGGCTGC GAGCCGTGGC CGATGCATCG
GCACAGTCGT CGATCTCATC TGTCAACCAG CAAGAAGGCG TTGAATTTTT GCGCTGGCTC
GAAGCGAAGC ATTTCACCTT CCTGGGGGCA CGTGACTACA ACGTGGTGCG TGATGACGAC
GGCGTGAGTC TGGTCGCCAT TCCCGAATCT GGCTTGGGTG TGCTGCGCGG GGTGGCTCAT
ACACCTACAA GTCGCCTCCC TGCTGACGCC GTGGCTTTTC TTGATTCAGA CCAACTGGTG
CTCATTACCA AGGCCATGAC GCGTTCCACC GTGCACCGAC CAGCCTGGCT GGACTATATT
GGTGTCAAAC GCTTCGACGA TGCCGGTCAG GTGGTAGGCG AAACACGGTT TCTGGGCTTG
TATACCTCTA CCGCCTATTC GGCGCCGGTT AGTGCCATTC CGCAAGTGCG CCTCCGCGCG
GCCGAGGTGA CAGCCGCTGC CGGTGTCGTG CCCGACAGCC ATGCGGCCAA GTCGTTGCAG
TCGATTCTGG ATGCCTACCC GCGCGATGAG TTGTTTCAGA TCGATACCGC CACGCTCATA
GAGCATGCAA TTGGCATCTT GCGCTTGCAA GAACGCCAGC GCACGCGCGT GTTCCTGCGC
AGTGATCCGT TTGGGCGCTT CACCTCGGTG CAAGTATTTG TTCCACGTGA CCGCTACAAC
ACCGAGTTGC GCATCAAGAT TGGTCAGGAG CTGGCCAGTG CGCTGGACGG CCGGTCAATT
GAGTTCACCC CGATGCTCAC CGACAGCCCG ATGGCACGCA TCCACTACCT GGTGCGGGCC
AAGGAGCAAG TGCCAAAAAA CCTGGATCTG CGAGCCCTGG AGGCACGCAT TGCCCGGCTG
GCGCAGCGCT GGGAAGACGA TTGCACGCAG GAACTGCTGT ACACCCATGG TGAGGGTCCG
GGCTTGACAC TGGCGCATCG CTTTGCCAAT GCCTTCCCCA CCGCTTACCG CGAGGACTTC
TCGGCACAGG TGGCGGCGGA GGACGCGCAG GCGCTGTCTG TCTTGACGCC CAGTTCGCCG
TTGGCTGTCA AGCTGTATCG CCCGCTGGAC GCTGGAGCGG GCCTGTTGCG TTTCAAAATC
TACAACACCT CCAAAGTTGC CTTGTCTGAT TCCCTGCCGG TGTTGGAGCG CATGGGTGCG
CGCGTGCTGG ACGAGCAGCC CTACCATGTC GGCAGCGGCA ACGCAGACAA GGGTAAAAAC
GAGGCGTTCT GGATTCATGA TCTGGGGCTG CAGTTGCCAG TGGGCACGGA GCTTTCCGTC
ATCAAGTCAC GTTTTGAAGC GCTATTTGTT CAGGCCTGGA AAGGTGAGGT GGAAAGTGAC
GATCTGAACA AGCTCGTGCT CAACACCAGT CTGGACTCCC GAGCCATTGC TGTGCTGCGC
GCTTACACGC GTTACTTCAA GCAGCTGGGC TTTGCCTTCA GCCAGAGCTA CATCGAAACG
ACGTTGTACA AAAATGCCTT GATCGCCCAG GAAATCAGTG CATTGTTCGA GGCCCGCTTT
AACCCCGCGC AGGAGGCGGA TCGCAGTAGT GTGCAAGAGC AAATTGGCCA GCGCATCGAG
GCGCTCCTGA GTGCCGTGGC CAGCCTGGAC GAAGACCGGA TATTGCGCCA GTTCTATGCC
AGTGTCATGG CCACCCTGCG CACCAACGCG TGGCAAACCA CGGACCTCGG TGTCGGCAAA
TCGTACCTGA GCTTCAAGCT GAACCCGCGC GAAGTACCGG GTGTGCCCGA GCCCAAGCCC
CTGTTCGAGA TTTGGGTCTA TTCGCCGCGT GTTGAGGCTC TGCACTTGCG CTTGGGAAAA
GTCGCCCGAG GTGGCCTTCG CTGGTCAGAT CGGCCGGAAG ATTTCCGCAC TGAAATACTG
GGCCTGGTTA AGGCCCAGCA CGTCAAAAAT ACAGTCATCG TGCCGGTGGG TTCCAAGGGC
GGGTTTGTCC TGAAGAAGGC GCCGCCTGCC GGTGAGCGCG AGGCTTATAT GGCCGAAGGC
ATCGCCTGCT ACAAACTGTT GCTGTCGGGC ATGCTGGACT TGACCGACAA CCTGGTGCAA
GGCCAGGTGG TGCCCCCGCC CAAGGTGGTC CGCCATGACC CTGACGATCC CTACTTGGTG
GTGGCCGCTG ACAAGGGCAC TGCCTCTTTC TCGGACATTG CCAACAGCGT GTCGGCTCAG
TATGGTTACT GGCTGGGCGA TGCATTTGCC TCCGGCGGCT CGGTGGGCTA TGACCACAAA
AAAATGGGGA TCACGGCGCG CGGCGCCTGG GAGTCGGTTA AGCGGCACTT CCGCGCGTTG
TCGATCAACA CGCAAACCAC GCCGTTCACC GTGGTCGGTA TCGGTGATAT GTCGGGCGAC
GTTTTTGGCA ACGGCATGCT GCTGTCCGAA CACATCCAGT TGGTGGTTGC GTTTGACCAC
CGCCACATCT TCATCGACCC CACGCCCGAT GTTGCGCTCA CCTTCGCTGA GCGCCAGCGT
TTGTTTGCGC TGCCACGTTC GAGCTGGGAC GATTTCGACA AGACCCTGAT TTCTGAAGGA
GGTGGCGTTT ATTCACGTGC CGCCAAGTCG ATCAAACTCT CGGCCCAGGC GCGCGCCGTT
ATCGGTATTG AGGCTCAGGA GCTCACGCCG GCGGCACTGC TGCATGCCGT TTTGCAGGCA
CCGGTAGACC TCATCTACAA CGGCGGCATT GGCACCTATG TCAAGGCCGC TTATGAGTCT
CATGCCCAGG TGGGTGACAA GGCGGGCGAC GCATTCCGCG TGAATGGCAG CGAACTGCGC
TGCAAGGTGC TGGTCGAAGG CGGTAACCTG GGTTGCACCC AACACGGCCG GGTCGAGTTC
GCGCAAAGAG GCGGTTTGAT CTACACCGAC GCCATAGACA ACTCGGCCGG TGTCGATTGT
TCCGACCACG AGGTCAACAT CAAGATATTG CTGGACCGGG TGGTGGAGGC GGGTGACTTG
ACGCTCAAGC AGCGCAACGA CCTGCTGGCC TCCATGACCG ACGAAGTGGG TCATCTGGTG
CTGGCGGACA ACTACTATCA GACCCAGGCG CTTGACATCG CCTGCCATCG TCCGCTGTAT
GTGCTGGACG GCCAGCAGCG CTTGATGCAA TGGCTTGAAG GGGCCGGGCG CCTGAACCGG
GCGATTGAAT TCCTGCCCAG TGAGGAGGAG ATCGCCTTGC GGCGGTCCCG CAAGCAGGGT
TTGACTGCGC CAGAAGGTGC CGTGCTGTTG GCCTATGCCA AGATGTCGGT GTTTGACGAC
CTGGTGGCCA GCAACCTGCC CGATGACCCC TATTTCAGTG GTGCCCTGCG CGCCTACTTC
CCCAAAGTCC TGAGTGAAAA ATTTGCCGAG GCGATTGCGC GGCATCCACT CAAGCGCGAA
ATCATCTCGA CTTTCATTGC CAACACGGTG GTCAACCGCA CGGGTGCGAC GTTCGTCAAC
TTTTTGGCGG CAGAAGCCGC CGCAACCGCC GCCGATGTGG TGCGCGCCTA CACCTTGGCG
CGGGAAATAT TTGATCTGGA AACGCTGTGG GACCAGATTG ACGCGCTCGA CTACCAGGTC
TCGACCTCTT TGCAGCTGGA CCTGTTGAGC AAATTGACCG CCATTGCGCA ACGCGCTTCG
CGCTGGATGC TGCGGCTGCG CGCCAAAGAC ACCGATCTGC CGACCCTGAT CCAGCGTTAC
CAACCCGGTG CGCGTGAGTT GCGCGGCAAT TTGGAGCATT GGTTGCCAGC CCAGGCCATT
GCGAACTGGC AGCAGGCGAC CCAAACCCTG GTGCAGGCCG GTGTGGCGCA GGCGCTGGCG
CAAAATCTGA CGGCGCTGGA GTTCATATTC CCGGCGCTCG ATCTGGTGGA CTTGGCGCAA
GGCACTAACG CCGACCTGGA GCAGGCAGCG CGCGCCTATT TCGGTGTCGA GCGTGCTCTT
GGCCTGAGTG CCTGGCGGGC CCAAATCAAC CGCTTGCCGA CCGACAGCTT GTGGCAGACC
CAAGCCAGGG GCAGTGCGCG TGACGACGTC TACTCGATTG CCAGCCAGGT CACACGCAGC
TTGCTGTCAG GCACGCAAAG CCTGTCGGAT TGGGAGGCGC AGCATCAAAT CGCCATTGAT
CGTTTGTGCA AACTGTTGCA GAACATCGGC ACGCAGGGTC CGGACCTGGC GCCGATCTCG
GTGGCCCTGC GTGAACTGCG GCATCTGGCG TAA
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| Protein sequence | MTHPALTELL TYTQEHAGPD ANRLADFVLA YFENADPDEI QARGPATLFA IANAHWRLAD
GPCAPQSARI RVFNPTLAED GFVSEHTAIQ IVHDDMPFLV DSVTMAVNRS GRTAHWIVHP
LLSVQRDKQG HLVKTASAAH LGEQTSPMAS FILVECDRIV SEVDRAALAG ELARILGDVR
ATVYDWQPML NRLRAVADAS AQSSISSVNQ QEGVEFLRWL EAKHFTFLGA RDYNVVRDDD
GVSLVAIPES GLGVLRGVAH TPTSRLPADA VAFLDSDQLV LITKAMTRST VHRPAWLDYI
GVKRFDDAGQ VVGETRFLGL YTSTAYSAPV SAIPQVRLRA AEVTAAAGVV PDSHAAKSLQ
SILDAYPRDE LFQIDTATLI EHAIGILRLQ ERQRTRVFLR SDPFGRFTSV QVFVPRDRYN
TELRIKIGQE LASALDGRSI EFTPMLTDSP MARIHYLVRA KEQVPKNLDL RALEARIARL
AQRWEDDCTQ ELLYTHGEGP GLTLAHRFAN AFPTAYREDF SAQVAAEDAQ ALSVLTPSSP
LAVKLYRPLD AGAGLLRFKI YNTSKVALSD SLPVLERMGA RVLDEQPYHV GSGNADKGKN
EAFWIHDLGL QLPVGTELSV IKSRFEALFV QAWKGEVESD DLNKLVLNTS LDSRAIAVLR
AYTRYFKQLG FAFSQSYIET TLYKNALIAQ EISALFEARF NPAQEADRSS VQEQIGQRIE
ALLSAVASLD EDRILRQFYA SVMATLRTNA WQTTDLGVGK SYLSFKLNPR EVPGVPEPKP
LFEIWVYSPR VEALHLRLGK VARGGLRWSD RPEDFRTEIL GLVKAQHVKN TVIVPVGSKG
GFVLKKAPPA GEREAYMAEG IACYKLLLSG MLDLTDNLVQ GQVVPPPKVV RHDPDDPYLV
VAADKGTASF SDIANSVSAQ YGYWLGDAFA SGGSVGYDHK KMGITARGAW ESVKRHFRAL
SINTQTTPFT VVGIGDMSGD VFGNGMLLSE HIQLVVAFDH RHIFIDPTPD VALTFAERQR
LFALPRSSWD DFDKTLISEG GGVYSRAAKS IKLSAQARAV IGIEAQELTP AALLHAVLQA
PVDLIYNGGI GTYVKAAYES HAQVGDKAGD AFRVNGSELR CKVLVEGGNL GCTQHGRVEF
AQRGGLIYTD AIDNSAGVDC SDHEVNIKIL LDRVVEAGDL TLKQRNDLLA SMTDEVGHLV
LADNYYQTQA LDIACHRPLY VLDGQQRLMQ WLEGAGRLNR AIEFLPSEEE IALRRSRKQG
LTAPEGAVLL AYAKMSVFDD LVASNLPDDP YFSGALRAYF PKVLSEKFAE AIARHPLKRE
IISTFIANTV VNRTGATFVN FLAAEAAATA ADVVRAYTLA REIFDLETLW DQIDALDYQV
STSLQLDLLS KLTAIAQRAS RWMLRLRAKD TDLPTLIQRY QPGARELRGN LEHWLPAQAI
ANWQQATQTL VQAGVAQALA QNLTALEFIF PALDLVDLAQ GTNADLEQAA RAYFGVERAL
GLSAWRAQIN RLPTDSLWQT QARGSARDDV YSIASQVTRS LLSGTQSLSD WEAQHQIAID
RLCKLLQNIG TQGPDLAPIS VALRELRHLA
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