Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1498 |
Symbol | |
ID | 3960940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1609959 |
End bp | 1611335 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637916318 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_522762 |
Protein GI | 89900291 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.275368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCTG AACAAGTCCT CTCCCAGTTT GAAGCCACCG GCGTACAGAC CTGTTTTCAT GGTCGTCATA TCAACCCTCA GATTTATGCA GATTTGAATG GTTCGAATTG GCATTTGAAG GATTACGAAT CTCGTGGTGG TTATCAGGCA TTGCGAAAGA TACTCGCAAA GAACAGCGGT GTAACTGCTG ACGACGTTAC TGCCTCAGGT ATGACGCCGG ATCAAGTGAT TGCAGTCGTC AAGGAATCCG GCTTGCGGGG GCGTGGCGGA GCAGGTTTTC CGACCGGGCT TAAGTGGAGC TTCATGCCAC GCCAGTATGC CGGGCAAAAG TATCTCGTCT GCAACTCTGA TGAGGGAGAG CCGGGCACTT GCAAGGACCG TGAAATACTG CAGTTCAATC CCCATATGGT GATCGAAGGC ATGATCATCG CAGCCTACGC CATGGGTATT GCAGTGGGCT ATAACTACAT CCATGGTGAA ATCTTCAAGA CCTATCTACG TTTTGAAGAG GCGATAGAAG AGGCGCGTGC GGCTGGTCTT CTTGGAAACA ATATTCTGGG TAGCGACTTC AGTTTCCAGT TGCATGCTGC TCATGGTTAT GGCGCCTATA TTTGCGGCGA AGAAACCTCA TTGCTTGAGT CACTTGAAGG CAAAAAAGGT CAACCTCGCT ACAAGCCACC GTTCCCGGCC AGTTTCGGTC TTTACGGGAA ACCTACCACC ATTAACAACA CGGAAACTTT CGCGGCGGTG CCGTGGATCA TCCGCAATGG TGGGCAGGCT TATCTGGCGT GTGGCAAGCC CAATAGTGGC GGTACCAAGA TATTCTCCAT CAGTGGTGAC GTGGAGCTTC CAGGTAATTA TGAAGTGCCG ATGGGTACGC CATTCTCCCA ATTATTGGAG CTTGCCGGTG GGGTGCGCAG TGGGCGCCAA CTCAAGGCCG TCATTCCCGG TGGATCCTCG TCGCCGGTGC TGCCTGGCAG CATCATGATG GACTGCACGA TGGACTACGA TTCCATTGCC AAGGCGGGTT CGATGCTGGG CTCTGGGGCA GTCATTGTTC TCGATGACAG CCGCTGCATG GTCAAGAGCC TGCAGCGTCT GAGCTACTTT TATATGCATG AGTCGTGTGG ACAGTGCACG CCTTGCCGTG AGGGTACAGG CTGGCTGTCG CGGGTAGTGG ACAGAATCGA AAATGGTCAC GGTCACGTCA CAGACCTCGA TCTGCTTGAC AACGTCGCTG AAAATATCAT GGGGCGTACC ATTTGCGCGC TGGGAGATGC GGCAGCCATG CCCGTACGCG CCATGATCAA GCATTTCCGC CCTGAATTTG AATACCACGT AGAGCACAAG ACCTGCATGG TCCCGCTGTA CGTTTGA
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Protein sequence | MLAEQVLSQF EATGVQTCFH GRHINPQIYA DLNGSNWHLK DYESRGGYQA LRKILAKNSG VTADDVTASG MTPDQVIAVV KESGLRGRGG AGFPTGLKWS FMPRQYAGQK YLVCNSDEGE PGTCKDREIL QFNPHMVIEG MIIAAYAMGI AVGYNYIHGE IFKTYLRFEE AIEEARAAGL LGNNILGSDF SFQLHAAHGY GAYICGEETS LLESLEGKKG QPRYKPPFPA SFGLYGKPTT INNTETFAAV PWIIRNGGQA YLACGKPNSG GTKIFSISGD VELPGNYEVP MGTPFSQLLE LAGGVRSGRQ LKAVIPGGSS SPVLPGSIMM DCTMDYDSIA KAGSMLGSGA VIVLDDSRCM VKSLQRLSYF YMHESCGQCT PCREGTGWLS RVVDRIENGH GHVTDLDLLD NVAENIMGRT ICALGDAAAM PVRAMIKHFR PEFEYHVEHK TCMVPLYV
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