Gene Rfer_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1498 
Symbol 
ID3960940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1609959 
End bp1611335 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content53% 
IMG OID637916318 
ProductNADH-quinone oxidoreductase, F subunit 
Protein accessionYP_522762 
Protein GI89900291 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.275368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCTG AACAAGTCCT CTCCCAGTTT GAAGCCACCG GCGTACAGAC CTGTTTTCAT 
GGTCGTCATA TCAACCCTCA GATTTATGCA GATTTGAATG GTTCGAATTG GCATTTGAAG
GATTACGAAT CTCGTGGTGG TTATCAGGCA TTGCGAAAGA TACTCGCAAA GAACAGCGGT
GTAACTGCTG ACGACGTTAC TGCCTCAGGT ATGACGCCGG ATCAAGTGAT TGCAGTCGTC
AAGGAATCCG GCTTGCGGGG GCGTGGCGGA GCAGGTTTTC CGACCGGGCT TAAGTGGAGC
TTCATGCCAC GCCAGTATGC CGGGCAAAAG TATCTCGTCT GCAACTCTGA TGAGGGAGAG
CCGGGCACTT GCAAGGACCG TGAAATACTG CAGTTCAATC CCCATATGGT GATCGAAGGC
ATGATCATCG CAGCCTACGC CATGGGTATT GCAGTGGGCT ATAACTACAT CCATGGTGAA
ATCTTCAAGA CCTATCTACG TTTTGAAGAG GCGATAGAAG AGGCGCGTGC GGCTGGTCTT
CTTGGAAACA ATATTCTGGG TAGCGACTTC AGTTTCCAGT TGCATGCTGC TCATGGTTAT
GGCGCCTATA TTTGCGGCGA AGAAACCTCA TTGCTTGAGT CACTTGAAGG CAAAAAAGGT
CAACCTCGCT ACAAGCCACC GTTCCCGGCC AGTTTCGGTC TTTACGGGAA ACCTACCACC
ATTAACAACA CGGAAACTTT CGCGGCGGTG CCGTGGATCA TCCGCAATGG TGGGCAGGCT
TATCTGGCGT GTGGCAAGCC CAATAGTGGC GGTACCAAGA TATTCTCCAT CAGTGGTGAC
GTGGAGCTTC CAGGTAATTA TGAAGTGCCG ATGGGTACGC CATTCTCCCA ATTATTGGAG
CTTGCCGGTG GGGTGCGCAG TGGGCGCCAA CTCAAGGCCG TCATTCCCGG TGGATCCTCG
TCGCCGGTGC TGCCTGGCAG CATCATGATG GACTGCACGA TGGACTACGA TTCCATTGCC
AAGGCGGGTT CGATGCTGGG CTCTGGGGCA GTCATTGTTC TCGATGACAG CCGCTGCATG
GTCAAGAGCC TGCAGCGTCT GAGCTACTTT TATATGCATG AGTCGTGTGG ACAGTGCACG
CCTTGCCGTG AGGGTACAGG CTGGCTGTCG CGGGTAGTGG ACAGAATCGA AAATGGTCAC
GGTCACGTCA CAGACCTCGA TCTGCTTGAC AACGTCGCTG AAAATATCAT GGGGCGTACC
ATTTGCGCGC TGGGAGATGC GGCAGCCATG CCCGTACGCG CCATGATCAA GCATTTCCGC
CCTGAATTTG AATACCACGT AGAGCACAAG ACCTGCATGG TCCCGCTGTA CGTTTGA
 
Protein sequence
MLAEQVLSQF EATGVQTCFH GRHINPQIYA DLNGSNWHLK DYESRGGYQA LRKILAKNSG 
VTADDVTASG MTPDQVIAVV KESGLRGRGG AGFPTGLKWS FMPRQYAGQK YLVCNSDEGE
PGTCKDREIL QFNPHMVIEG MIIAAYAMGI AVGYNYIHGE IFKTYLRFEE AIEEARAAGL
LGNNILGSDF SFQLHAAHGY GAYICGEETS LLESLEGKKG QPRYKPPFPA SFGLYGKPTT
INNTETFAAV PWIIRNGGQA YLACGKPNSG GTKIFSISGD VELPGNYEVP MGTPFSQLLE
LAGGVRSGRQ LKAVIPGGSS SPVLPGSIMM DCTMDYDSIA KAGSMLGSGA VIVLDDSRCM
VKSLQRLSYF YMHESCGQCT PCREGTGWLS RVVDRIENGH GHVTDLDLLD NVAENIMGRT
ICALGDAAAM PVRAMIKHFR PEFEYHVEHK TCMVPLYV