Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1495 |
Symbol | |
ID | 3960937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1607605 |
End bp | 1608213 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637916315 |
Product | NADH (or F420H2) dehydrogenase, subunit C |
Protein accession | YP_522759 |
Protein GI | 89900288 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.285682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCAT ACGCTGTAAA TCCACAATCT ATCAAAGTTC ATGTTGAGGC TGCGCTTGGC GACTTGCTTA TCAGCAGCGT GCTTCGACTA GATGAACTTA CCGTTGTCGT GGACGGTGCT CATTATTTGC AGGCCGCAAA GATTCTGCGA GACGACCCAA ACTGTCGGTT CGAGCAACTG ATGGATTTGT GCGGCGTTGA TTACTCTACG TACAAGGATC AGCCCCAAAC TGGATTGCGT TATTGTGTGG TATCCCACCT TTTGTCGGTA AGCCTGAACC AGCGCGTGCG GCTCAAGGTG TTTGCGCCCG ATGACAATTT GCCGGTGGTG CAGTCCTTGT GCGATGTCTG GAGTTCTGCG AACTGGTTTG AGCGGGAAGC TTTTGATTTG TTTGGCATCG TTTTCGAGGG GCATGCTGAT TTGCGCCGTA TCCTGACCGA CTATGGTTTC GTCGGTCATC CGTTCCGAAA AGATTTTCCG GTTTCAGGTC ATGTCGAGAT GCGTTATGAC GCCGAGCTAA AGCGCGTTGT GTATCAGCCC GTCACGATTG AGCCACGCGA GATTACACCG CGCATCATCC GTGAAGACAA CTACGGGGGC TTGCACTAG
|
Protein sequence | MTSYAVNPQS IKVHVEAALG DLLISSVLRL DELTVVVDGA HYLQAAKILR DDPNCRFEQL MDLCGVDYST YKDQPQTGLR YCVVSHLLSV SLNQRVRLKV FAPDDNLPVV QSLCDVWSSA NWFEREAFDL FGIVFEGHAD LRRILTDYGF VGHPFRKDFP VSGHVEMRYD AELKRVVYQP VTIEPREITP RIIREDNYGG LH
|
| |