| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1491 |
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| Symbol | tpiA |
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| ID | 3960932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1605357 |
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| End bp | 1606100 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916310 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_522755 |
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| Protein GI | 89900284 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.020715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA AGCTGATCGC AGGCAACTGG AAAATGAACG GCAGTCTGGC TGCCAATGAG
GCCCTTGTGA AAGGTCTTCG AGTTGGGGTG GGCGCGTCAG TCTGTCAGGT CGCGTTGTGT
GTGCCGTCGG TCTATCTGGC GCAATGCCAG GCGCTGCTTG TTGGCACTGC CATTGCTCTG
GGTGCGCAGG ATCTTTCCCA GCATGAGGTG GGCGCCTTCA CGGGTGAAAT TTCTGGGGCC
ATGCTTCAGG AATTTGGTGT ACGTTATTGC ATCGTTGGTC ATTCCGAGCG TCGTCAATAT
CACTTTGAGA CGGATGCCCT CGTTGCAGCC AAAGCGCAGC GGGCTCTGGC CTGTGGCATC
ACGCCGATTG TGTGTGTCGG CGAGACCCTG GCTGAGCGCG AAGCTGGCAG GACCGAAGAA
GTCGTCAAGC GTCAACTGGC GGCGGTGATT CACGCCAATG GTCACTGCAT CAGCGAGGTT
GTAGTGGCCT ACGAGCCGGT GTGGGCCATC GGAACGGGCA AGACAGCCAG CATCGAGCAA
GCGCAGCAAG TGCACTCGGT GCTGCGCCAA CAGTTGCAGG CCGCTTCAAT CCAGGCGGAT
CGTATTCAGA TAATTTACGG CGGCAGCATG AATGCTGCGA ACGCCGCGGA GTTGCTGGCT
CAGCCAGATA TCGATGGTGG CCTGGTGGGT GGTGCCTCGC TCAAGGTCCC GGATTTTTTA
TCAATTATTG CTTCTGCTTG CTGA
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| Protein sequence | MRKKLIAGNW KMNGSLAANE ALVKGLRVGV GASVCQVALC VPSVYLAQCQ ALLVGTAIAL
GAQDLSQHEV GAFTGEISGA MLQEFGVRYC IVGHSERRQY HFETDALVAA KAQRALACGI
TPIVCVGETL AEREAGRTEE VVKRQLAAVI HANGHCISEV VVAYEPVWAI GTGKTASIEQ
AQQVHSVLRQ QLQAASIQAD RIQIIYGGSM NAANAAELLA QPDIDGGLVG GASLKVPDFL
SIIASAC
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