Gene Rfer_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1486 
Symbol 
ID3960927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp1599455 
End bp1600099 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID637916305 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_522750 
Protein GI89900279 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.108748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC CCGCTATTCA CATAGTTGAC GATGACCCGG ACATTCGGGA TGGACTGGCC 
TGGCTGTTCG ACTCGCGCGG CTACGTGGCA GCCACGTGGG ACGGCGGCCC GGCGTTTTTG 
GACGCGGCGA AGGCGATGCT GGGTCATTGG GGTCATGCGG TGGTGTTGCT CGATGTCCGC 
ATGACGCCCT TGTCCGGGTT GGTCACGTTT GAGCGGCTCA AGGCGCTGTG TTGCCCCTGG 
CCCGTGTTGT TTTTGACCGG CAACGGCGAC GTTGGCATGG CGGTGGCGGC CGTCAAGAGC 
GGTGCCTGGG ATTTTCTGGA AAAGCCGTTT CAGGACAATG AGTTGGTCGA CCGGGTGGAG 
CAAGCGCTGG CGGCGGCGTC AGCGATCAGT GACACCGATC TGGAGGTGTA TCGCCTCAAG 
CAGGCGCTGA CCAGTCTGAG TCCGCGTGAG CGTGAAGTTC TGGATGAACT GATTCGCGGT 
CACTACAACA AGACCATTGC GGACCATCTC GGCATTACCC CACGCACCGT CGAGTTCCAC 
CGATCGCATA TTTTTGAAAA AATGGGCGTC AGTTCGGCGG TTGAGCTGGC CCACAAGCTC 
GGGCGCCTGC AGCCGTTGTC GATCATCCAG CCGCCGCAGA CTTGA
 
Protein sequence
MNQPAIHIVD DDPDIRDGLA WLFDSRGYVA ATWDGGPAFL DAAKAMLGHW GHAVVLLDVR 
MTPLSGLVTF ERLKALCCPW PVLFLTGNGD VGMAVAAVKS GAWDFLEKPF QDNELVDRVE 
QALAAASAIS DTDLEVYRLK QALTSLSPRE REVLDELIRG HYNKTIADHL GITPRTVEFH 
RSHIFEKMGV SSAVELAHKL GRLQPLSIIQ PPQT