| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1483 |
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| Symbol | |
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| ID | 3960924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1595210 |
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| End bp | 1596205 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637916302 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_522747 |
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| Protein GI | 89900276 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0475923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA AATTGGTCCT TGCCAGTGCT TTGCTGGCCA TCGGTTTGAG CGCAAGTGCC
CAGACCGTCA TCAAGTTCAG CCACGTCGTT GCGGTCGATA CACCCAAGGG CCAGGCAGCT
TTGTTCTTCG CCAAAAAGGC GGGCGAGCTG ACCAAAGGCA AGGTCAAGGT CGAGGTCTAT
GCCAACAGCG CCTTGTACAA AGACAAGGAA GAAATGGAAG CGCTGCAAAT CGGCTCAGTG
CAAATGCTCG CGCCTTCACT CGCCAAGTTT GGCCCATTGG GAGTGAAAGA GTTTGAAGCT
TTTGACCTGC CTTTCATCTT TGATGACACG GCCGATTTGC ACAAGATCAC TCAAGGCCCG
GTCGGTGCTG GTTTGCTGGC CAAGCTCGAC GCCAGAGGCA TTCATGGCCT GGCGTTCTGG
GACAACGGTT TCAAGGCTTT CTCGGCCAAC ACACCGCTCA AAACACCAGC TGACTTCAAG
GGCAAAAAAT TCCGCATTCA GTCTTCCAAG GTGCTGGAAG AAGAAATTCG CTCGGTCGGC
GGCATTCCGC AGGTGATGGC ATTCTCAGAG GTTTATCAAG CGCTGCAAAC CGGCGTGGTC
GATGGCACAG AAAACCCGAT CTCGAACTTC TATACGCAAA AAATGCATGA AGTGCAGAAG
CATCTCTCGA TCACCAATCA TGGCTACCTT GGCTATGCAG TGATCGTGAA CAAGAAGTTC
TGGGACGGCC TGCCCGCTGA CATTCGCGGC GAGCTGGAAC AGGCGATGAA AGAAGCCACC
GTTTATGCCA ACCAGATTGC CCAGGAAGAA AACGACAAGG CACTTGACGG CGTGAAGAAG
AGCGGCAAAA CCACCGTTTA CGTGCCCACC AAAGAAGAGC GCCTGGCCCT GAAGAAAGCC
ATGGCCCCGG TGCACACCAA AATGGCCGAT CGCGTTGGCA AGGACACGCT GCAACAAATC
TACAAAGCCA CTGGCTTTGA CCCGGCCAAG CTCTAA
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| Protein sequence | MKLKLVLASA LLAIGLSASA QTVIKFSHVV AVDTPKGQAA LFFAKKAGEL TKGKVKVEVY
ANSALYKDKE EMEALQIGSV QMLAPSLAKF GPLGVKEFEA FDLPFIFDDT ADLHKITQGP
VGAGLLAKLD ARGIHGLAFW DNGFKAFSAN TPLKTPADFK GKKFRIQSSK VLEEEIRSVG
GIPQVMAFSE VYQALQTGVV DGTENPISNF YTQKMHEVQK HLSITNHGYL GYAVIVNKKF
WDGLPADIRG ELEQAMKEAT VYANQIAQEE NDKALDGVKK SGKTTVYVPT KEERLALKKA
MAPVHTKMAD RVGKDTLQQI YKATGFDPAK L
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