| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1460 |
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| Symbol | |
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| ID | 3962908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1569983 |
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| End bp | 1571029 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916278 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_522724 |
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| Protein GI | 89900253 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00145692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA TCCATTTCAA CCGCCGAACC TTGCTTGCGG TCACGGCCTG TGCGGCAGCT
TCTGTGGCTG CGCCTGCCCT GTGGGCGCAG CCCCGCCTAG AAAAAACGAA GATAGCCATT
GCAGTGGGCG GTAAGGCAGC GTTTTACAAC CTGCCTTTGA CCATCGCTGA GCAGCTTGGT
TATTTCAAGG CCGAAGGCCT GGAGGTCGAT ATCAGTGATT TTGCGGGGGG GTCGCAGGCC
TTGGCGGCGG TTGAAGGCGG TTCGGCCGAC GTTGTTTCGG GTGCCTATGA GCACACCATC
ACCCTGCAGA CCCGGGGGCA GAGCTTTCAG GCTTTTGTGT TGCAGGGGCG AGCGCCTGCC
ATCGCGATCG GCATATCGGT CAAGGCCATG CCCCATTACA AAACGATAGC CGATCTCAAG
GGCAAAAGAA TCGGCATTTC GGCACTTGAC TCGTCAACCC AACGGGTGGT GCAGTTGATT
CTTTCGCGTG CCGGGCTCAA GGCGGACGAT GTGAACTACG TCGGTGTGGG CACGGCTGCA
GGCGCTTTGA CTGCTTTCCG TACCGGCCAG ATTGATGCTT TGAGTACGGT TGACCCGGTG
CTGACCATGC TGGAGCAAAA AGGCGAGATC CGCATCATTA CCGATACCCG CACACTCAAA
GGGACGGCGG AGGTCTTTGG AGGGGTCATG CCGGCGGGTT GCCTGTACGC GCCGCTGGAT
TTTGTAAAGA AATGTCCAAA TACCGTGCAA GCCCTGACCA ACGCCATGGT GCACAGCCTG
AAGTGGCTGC AAACGGCCGG ACCGAGCGAC ATCATCAGAG TCGTTCCAGA AGCCTATTTT
CTGCGGGATC GGGCGCTTTA CCTGGCCGCC TTCAACAAGG TTCGTGAGGC CATCTCTCCC
GATGGTTTGA TACCTGTTGA GGGGCCGCAG ACGGCCGCCC GTGCGCTGGC CCGTTTTGAC
CCGACTGTCA AGTTGAGCAA CTCCGACCTT GCTAAAACCT ACACCAATGT GTTTGCCATC
AAGGCCAAAG AGCGTTTTAA CGCCTGA
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| Protein sequence | MNDIHFNRRT LLAVTACAAA SVAAPALWAQ PRLEKTKIAI AVGGKAAFYN LPLTIAEQLG
YFKAEGLEVD ISDFAGGSQA LAAVEGGSAD VVSGAYEHTI TLQTRGQSFQ AFVLQGRAPA
IAIGISVKAM PHYKTIADLK GKRIGISALD SSTQRVVQLI LSRAGLKADD VNYVGVGTAA
GALTAFRTGQ IDALSTVDPV LTMLEQKGEI RIITDTRTLK GTAEVFGGVM PAGCLYAPLD
FVKKCPNTVQ ALTNAMVHSL KWLQTAGPSD IIRVVPEAYF LRDRALYLAA FNKVREAISP
DGLIPVEGPQ TAARALARFD PTVKLSNSDL AKTYTNVFAI KAKERFNA
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