| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1440 |
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| Symbol | |
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| ID | 3963137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1553180 |
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| End bp | 1554526 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637916257 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_522704 |
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| Protein GI | 89900233 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.022063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAGA CATCAGCGCG CAAGCCACTT TACAAGTCAC TCTATGCACA GGTCATATTC
GCCGTCACCA TCGGCGTGTT GCTGGGGCAC TTCTATCCTC AGTTGGGTAC CCAGATGAAA
CCTTTGGGCG ACGGTTTCAT CAAGTTGATC AAAATGATCA TCGCGCCAAT CATTTTTTGT
ACCGTCGTGG TCGGCATTGC CGGCATGGAA GACATGAAGA AGGTGGGTAA GACAGGTGGT
CTGGCTCTCC TCTATTTCGA AGTGATGTCT ACATTGGCCT TGGTGGTTGG TTTACTCGTC
GTCAACGTAT TGCAACCTGG CACGGGAATG CATGTGGATC CGATGTCACT GGACACCAAA
GGAATTGCCG CTTACACGGC GCCCGGGAAG ATGCAGGGTT CTGTGGATTT CCTGCTCAAT
GTCATTCCAT CCTCGGTGGT TGACGCATTT GCCAAGGGTG AGATCCTTCA GGTCTTGTTG
TTCTCCGTAT TGTTTGGCTT CGCGCTGCAC AAGTTCGGCG GCCGCGGCAC GATGGTGTTT
GATTTCATTG AGAAGTTTTC CCACGTGTTA TTCGACATCG TCGGCATCAT CATGAAGGTC
GCTCCGATTG GTGCCTTTGG TGCCATGGCG TTCACGATCG GGAAATACGG TCTGGGTTCG
CTGTTTTCTT TGGGCAAACT CATGGGCGCG TTTTACTTGA CCTGCCTGAT CTTTGTTTTC
GGGGTATTGG GCATCGTTAG TCGTTTAAAT GGTTTCAGCG TGTTCAAGTT TGTGCGCTAT
ATCAAGGAAG AATTATTGAT CGTGTTGGGC ACCTCGTCTT CAGAATCGGT GTTGCCACGC
ATGATGGAAA AGATGGAGAA CTTGGGTGCG CGCAAGTCGG TGGTCGGGTT GGTGATTCCA
ACCGGCTACT CCTTCAATCT GGACGGCACC TCGATTTACC TGACCATGGC AGCGGTTTTC
ATCGCCCAAG CCACGGACAC GCCGATGACG CTGATGCAGC AAGTGACCCT GTTGGCCGTG
CTGCTGCTGA CCTCCAAGGG CGCAGCAGGT GTCACAGGCA GCGGGTTTAT TGTGCTCGCG
GCCACCTTGT CCGCAGTGGG GGGCGTACCA GTGGCGGGTT TGGCACTTAT TCTTGGAATT
GACCGCTTTA TGTCTGAGGC GCGGGCGTTG ACCAACTTGG TGGGTAACGG TGTGGCAACG
CTGGTGGTGG CGAAATGGAC AGGGGATCTG GACATGACCC GCTTGCACCA GGGGCTGGAT
AACCCAACGA CGCGGGAGTC GCAGGAGCCG GAGGCCATTT TGGACTTGCA GGTCACGCAC
ATGGATGTGA TGAAGGCCAA GAACTGA
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| Protein sequence | MSKTSARKPL YKSLYAQVIF AVTIGVLLGH FYPQLGTQMK PLGDGFIKLI KMIIAPIIFC
TVVVGIAGME DMKKVGKTGG LALLYFEVMS TLALVVGLLV VNVLQPGTGM HVDPMSLDTK
GIAAYTAPGK MQGSVDFLLN VIPSSVVDAF AKGEILQVLL FSVLFGFALH KFGGRGTMVF
DFIEKFSHVL FDIVGIIMKV APIGAFGAMA FTIGKYGLGS LFSLGKLMGA FYLTCLIFVF
GVLGIVSRLN GFSVFKFVRY IKEELLIVLG TSSSESVLPR MMEKMENLGA RKSVVGLVIP
TGYSFNLDGT SIYLTMAAVF IAQATDTPMT LMQQVTLLAV LLLTSKGAAG VTGSGFIVLA
ATLSAVGGVP VAGLALILGI DRFMSEARAL TNLVGNGVAT LVVAKWTGDL DMTRLHQGLD
NPTTRESQEP EAILDLQVTH MDVMKAKN
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